RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 FREM2Q5SZK8 3169 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 KMT2BQ9UMN6 2715 aaPredicted RBP8.1□□□□□ -1.11
CDH3-209ENST00000569080 ZFHX4Q86UP3 3567 aa8.1□□□□□ -1.11
CDH3-209ENST00000569080 ITIH6Q6UXX5 1313 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 ZZEF1O43149 2961 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 C4orf47A7E2U8 309 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 LGALS16A8MUM7 142 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 MAP3K13O43283 966 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 SYNCRIPO60506 623 aaKnown RBP8.09□□□□□ -1.11
CDH3-209ENST00000569080 LSM8O95777 96 aaKnown RBP8.09□□□□□ -1.11
CDH3-209ENST00000569080 MMEP08473 750 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 ENGP17813 658 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 CCR1P32246 355 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 KRT9P35527 623 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 FLT3P36888 993 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 GGCXP38435 758 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 DPP6P42658 865 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 CTSOP43234 321 aaPredicted RBP8.09□□□□□ -1.11
CDH3-209ENST00000569080 BPIFB4P59827 614 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 NOMO3P69849 1222 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 CDK17Q00537 523 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 SLC6A3Q01959 620 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 MYL5Q02045 173 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 CENPCQ03188 943 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 CDH18Q13634 790 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 E2F5Q15329 346 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 PLEKHG6Q3KR16 790 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 C5orf22Q49AR2 442 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 FNDC3BQ53EP0 1204 aaKnown RBP8.09□□□□□ -1.11
CDH3-209ENST00000569080 PITRM1Q5JRX3 1037 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 EFHC1Q5JVL4 640 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 IL31Q6EBC2 164 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 FBXL22Q6P050 247 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 XYLT1Q86Y38 959 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 ZNF683Q8IZ20 524 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 LGI2Q8N0V4 545 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 DEFB119Q8N690 84 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 KDM1BQ8NB78 822 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 TMEM35BQ8NCS4 154 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 OR52K2Q8NGK3 314 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 SLC20A1Q8WUM9 679 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 DNASE2BQ8WZ79 361 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 PRCCQ92733 491 aaPredicted RBP8.09□□□□□ -1.11
CDH3-209ENST00000569080 IGSF8Q969P0 613 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 ALG14Q96F25 216 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 PGAP3Q96FM1 320 aaPredicted RBP8.09□□□□□ -1.11
CDH3-209ENST00000569080 SIPA1Q96FS4 1042 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 NOX5Q96PH1 765 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 DDX50Q9BQ39 737 aaKnown RBP8.09□□□□□ -1.11
CDH3-209ENST00000569080 STK33Q9BYT3 514 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 VPS16Q9H269 839 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 MTG2Q9H4K7 406 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 TMEM9BQ9NQ34 198 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 PRSS16Q9NQE7 514 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 PIGVQ9NUD9 493 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 FANCLQ9NW38 375 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDH3-209ENST00000569080 TMEM63CQ9P1W3 806 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 STIM2Q9P246 746 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 SLCO1B1Q9Y6L6 691 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 AKAP13Q12802 2813 aa8.09□□□□□ -1.11
CDH3-209ENST00000569080 TPRP12270 2363 aaKnown RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 TP53BP1Q12888 1972 aaPredicted RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 DOCK4Q8N1I0 1966 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 USP24Q9UPU5 2620 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 A0A1B0GVM2 712 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 FAM170AA1A519 330 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 TYW5A2RUC4 315 aaKnown RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 TCAF2A6NFQ2 919 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 F5H5T6 163 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 SIN3BO75182 1162 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 GJB3O75712 270 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 MBD3O95983 291 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 ASLP04424 464 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 CYP1A1P04798 512 aaPredicted RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 ATP5BP06576 529 aaKnown RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 SERPINF2P08697 491 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 SLC2A3P11169 496 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 CHRNB2P17787 502 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 POLR2EP19388 210 aaKnown RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 KCNA4P22459 653 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 PMLP29590 882 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 NOS2P35228 1153 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 MATKP42679 507 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 CXCR3P49682 368 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 COPB1P53618 953 aaKnown RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 RPS14P62263 151 aaKnown RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 FMO1Q01740 532 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 STX1AQ16623 288 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 DUOXA1Q1HG43 343 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 HNRNPA1L2Q32P51 320 aaKnown RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 C2CD6Q53TS8 623 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 CCDC183Q5T5S1 534 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 TTC39BQ5VTQ0 682 aaPredicted RBP8.08□□□□□ -1.12
CDH3-209ENST00000569080 TAF3Q5VWG9 929 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 OR6B2Q6IFH4 312 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 C14orf80Q86SX3 495 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 ZDHHC17Q8IUH5 632 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 APCDD1Q8J025 514 aa8.08□□□□□ -1.12
CDH3-209ENST00000569080 CCAR2Q8N163 923 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms