RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 RAB11FIP4Q86YS3 637 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 CPXCR1Q8N123 301 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 CCDC33Q8N5R6 958 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 LINC01465Q8N7H1 131 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZNF668Q96K58 619 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 FAM227BQ96M60 508 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 GDF15Q99988 308 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 HERPUD2Q9BSE4 406 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 QTRT1Q9BXR0 403 aaKnown RBP3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 NLRC4Q9NPP4 1024 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 TRIM36Q9NQ86 728 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 HEYLQ9NQ87 328 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 TMOD3Q9NYL9 352 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 MYO1AQ9UBC5 1043 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 MGAT4CQ9UBM8 478 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 SWAP70Q9UH65 585 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 PCDH11XQ9BZA7 1347 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 PCDH11YQ9BZA8 1340 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 COL15A1P39059 1388 aa3.88□□□□□ -1.79
HMGB1P6-201ENST00000569046 ADAMTS7Q9UKP4 1686 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 CASP8AP2Q9UKL3 1982 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 SLX4Q8IY92 1834 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 GLTPD2A6NH11 291 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 DNAJC9-AS1A6NH13 148 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 POC1B-GALNT4F8VUJ3 575 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 M0R3H8 397 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 APOL1O14791 398 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 AREL1O15033 823 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 FYB1O15117 783 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 TNRC18O15417 2968 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 THAP12O43422 761 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 KCNQ3O43525 872 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 DDNO94850 711 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 MT-CO3P00414 261 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 ARP10275 920 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 CYP2A6P11509 494 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 VEGFAP15692 232 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 ATF7P17544 494 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 EPHB2P29323 1055 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 TM4SF4P48230 202 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 AK2P54819 239 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 MTAPQ13126 283 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 KRT72Q14CN4 511 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 MAPRE1Q15691 268 aaKnown RBP3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 LONRF1Q17RB8 773 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 HIBCHQ6NVY1 386 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 CATSPERGQ6ZRH7 1159 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 KIAA0408Q6ZU52 694 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 GALNT4Q8N4A0 578 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 C8orf58Q8NAV2 365 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 ZDHHC12Q96GR4 267 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 PRR11Q96HE9 360 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 ABHD8Q96I13 439 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 KAZALD1Q96I82 304 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 TNIP3Q96KP6 325 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 C5orf34Q96MH7 638 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 ASB2Q96Q27 587 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 SLC25A32Q9H2D1 315 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 PDGFCQ9NRA1 345 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 NKX1-2Q9UD57 310 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 STEAP1Q9UHE8 339 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 TNFRSF18Q9Y5U5 241 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 MORC2Q9Y6X9 1032 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 PLEKHG2Q9H7P9 1386 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 NSD3Q9BZ95 1437 aa3.87□□□□□ -1.79
HMGB1P6-201ENST00000569046 SCN11AQ9UI33 1791 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 A8MVJ9 347 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 F5H423 210 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 CA12O43570 354 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 CBFA2T3O75081 653 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 NDST3O95803 873 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 PRR35P0CG20 571 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 HARSP12081 509 aaKnown RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 SFPQP23246 707 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 TNFSF4P23510 183 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 RBL1P28749 1068 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 TNNT2P45379 298 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 PPM1FP49593 454 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 SSBP2P81877 361 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 IFIT5Q13325 482 aaKnown RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 PMS2P11Q13670 270 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 SIM2Q14190 667 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 FAM187BQ17R55 369 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 TUBB8Q3ZCM7 444 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 SUPT20HL1Q3ZLR7 823 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 FAM209BQ5JX69 171 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 RAP1GAP2Q684P5 730 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 ABLIM2Q6H8Q1 611 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 MZT2AQ6P582 158 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 SERPINA13PQ6UXR4 307 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 KRBA2Q6ZNG9 492 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 YTHDF3Q7Z739 585 aaKnown RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 SMAP1Q8IYB5 467 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 FAM186BQ8IYM0 893 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 FAM9BQ8IZU0 186 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 MAFAQ8NHW3 353 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 SUN3Q8TAQ9 357 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 POF1BQ8WVV4 589 aa3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 EDC3Q96F86 508 aaKnown RBP3.86□□□□□ -1.79
HMGB1P6-201ENST00000569046 COLEC11Q9BWP8 271 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms