RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 OMDQ99983 421 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 MTG2Q9H4K7 406 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 ERVMER34-1Q9H9K5 563 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 LRRC4Q9HBW1 653 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 CISHQ9NSE2 258 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 SFMBT1Q9UHJ3 866 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 NAV2Q8IVL1 2488 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 C10orf142B7Z368 130 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 TLR4O00206 839 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 XPO1O14980 1071 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 IRAK2O43187 625 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 MSI1O43347 362 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 TBL1XO60907 577 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 KRT13P13646 458 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 PDIA4P13667 645 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 GLDCP23378 1020 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 NR2F2P24468 414 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 CSKP41240 450 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 SLC11A2P49281 568 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 RAD23BP54727 409 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 ENPEPQ07075 957 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 ADIGQ0VDE8 80 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 CCDC173Q0VFZ6 552 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 ARID5BQ14865 1188 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 KMT5BQ4FZB7 885 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 TAF1BQ53T94 588 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 PIK3R6Q5UE93 754 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 BSPRYQ5W0U4 402 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 RFWD3Q6PCD5 774 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 PCSK4Q6UW60 755 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 MMAAQ8IVH4 418 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 DHX40Q8IX18 779 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 SIX6OS1Q8N1H7 587 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 DCBLD1Q8N8Z6 715 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 KDM1BQ8NB78 822 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 EDEM1Q92611 657 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 TTC17Q96AE7 1141 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 LGMNQ99538 433 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 MMRN2Q9H8L6 949 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 TMEM8AQ9HCN3 771 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 ABCC13Q9NSE7 274 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 TRAF3IP3Q9Y228 551 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 SPTA1P02549 2419 aa12.26□□□□□ -0.45
GTF3C1-209ENST00000568569 COL6A6A6NMZ7 2263 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 TARSL2A2RTX5 802 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 TYW5A2RUC4 315 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 YJEFN3A6XGL0 299 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 E7ENQ6 273 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 TULP2O00295 520 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 WNT9AO14904 365 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 IGLV3-27P01718 113 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 ACP1P24666 158 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 SLC8A1P32418 973 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 ADPRHP54922 357 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 INSM1Q01101 510 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 KCNH2Q12809 1159 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 BNIP3Q12983 259 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 GOLGA7BQ2TAP0 167 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 FAM133BQ5BKY9 247 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 C9orf64Q5T6V5 341 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 RESP18Q5W5W9 173 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 NUGGCQ68CJ6 796 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 KRT39Q6A163 491 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 SND1Q7KZF4 910 aaKnown RBP eCLIP12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 UNC45BQ8IWX7 931 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 FAM186BQ8IYM0 893 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 ZNF248Q8NDW4 579 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 OR14C36Q8NHC7 312 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 FIBINQ8TAL6 211 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 LMLNQ96KR4 655 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 STIM2Q9P246 746 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 HESX1Q9UBX0 185 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 TSPAN16Q9UKR8 245 aa12.25□□□□□ -0.45
GTF3C1-209ENST00000568569 LATO43561 262 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 MAGEC1O60732 1142 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 ADH1BP00325 375 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 SRPRAP08240 638 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 GOT1P17174 413 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 C5AR1P21730 350 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 SLC6A4P31645 630 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 GTF2H1P32780 548 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 PSMC2P35998 433 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 ME1P48163 572 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 PSMD8P48556 350 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 UCNP55089 124 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 PCBP4P57723 403 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 E2F1Q01094 437 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 RHDQ02161 417 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 BST2Q10589 180 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 CDH18Q13634 790 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 NFIL3Q16649 462 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 BROXQ5VW32 411 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 NAPEPLDQ6IQ20 393 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 MSANTD2Q6P1R3 559 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 KANSL1Q7Z3B3 1105 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 AADATQ8N5Z0 425 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 MFSD2AQ8NA29 543 aa12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 HJURPQ8NCD3 748 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-209ENST00000568569 TATDN2Q93075 761 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms