RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 PSMG2Q969U7 264 aa8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 PGAP3Q96FM1 320 aaPredicted RBP8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 RBM41Q96IZ5 413 aaKnown RBP8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 MYRFLQ96LU7 910 aa8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 CDK5RAP1Q96SZ6 601 aaKnown RBP8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 TBCBQ99426 244 aa8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 FAM204AQ9H8W3 233 aa8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 OLA1Q9NTK5 396 aaKnown RBP8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 CLIC5Q9NZA1 410 aa8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 UXTQ9UBK9 157 aaPredicted RBP8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 RNF14Q9UBS8 474 aa8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 MAGED2Q9UNF1 606 aaPredicted RBP8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 NAALADL1Q9UQQ1 740 aa8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 ASB3Q9Y575 518 aa8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 FLNBO75369 2602 aaKnown RBP8.91□□□□□ -0.98
KLHDC4-220ENST00000568338 ZZEF1O43149 2961 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 OBSL1O75147 1896 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 CHURC1-FNTBB4DL54 471 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 PGRMC1O00264 195 aaKnown RBP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 TM4SF5O14894 197 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 MDM4O15151 490 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 ZNF185O15231 689 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 CEP104O60308 925 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 ECI2O75521 394 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 ENDOD1O94919 500 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 TRUB2O95900 331 aaKnown RBP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 RALAP11233 206 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 TCF4P15884 667 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 HMGA1P17096 107 aaKnown RBP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 TFE3P19532 575 aaPredicted RBP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 GBP1P32455 592 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 CXCL12P48061 93 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 PPP3CCP48454 512 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 FNTBP49356 437 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 TAF10Q12962 218 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 NME3Q13232 169 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 SRSF5Q13243 272 aaKnown RBP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 FZD5Q13467 585 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 SH3PXD2AQ5TCZ1 1133 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 DCAF12L1Q5VU92 463 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 OTUD1Q5VV17 481 aaPredicted RBP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 MSANTD2Q6P1R3 559 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 SCYL2Q6P3W7 929 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 SND1Q7KZF4 910 aaKnown RBP eCLIP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 BNIPLQ7Z465 357 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 SCD5Q86SK9 330 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 TADA2BQ86TJ2 420 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 TAC4Q86UU9 113 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 LONP2Q86WA8 852 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 CCDC50Q8IVM0 306 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 RASGEF1CQ8N431 466 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 CEP112Q8N8E3 955 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 MNS1Q8NEH6 495 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 ITFG1Q8TB96 612 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 DQX1Q8TE96 717 aaKnown RBP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 TEKT4Q8WW24 435 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 ZCCHC14Q8WYQ9 949 aaKnown RBP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 DNASE1L2Q92874 299 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 CAPZA3Q96KX2 299 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 ZNF512Q96ME7 567 aaPredicted RBP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 SERPINB11Q96P15 392 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 PEBP4Q96S96 227 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 NAP1L3Q99457 506 aaPredicted RBP8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 ZWILCHQ9H900 591 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 NMUR1Q9HB89 426 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 DDIT4Q9NX09 232 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 PCSK1NQ9UHG2 260 aa8.9□□□□□ -0.98
KLHDC4-220ENST00000568338 SYNJ2BP-COX16A0A087WUM0 186 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 LRRD1A4D1F6 860 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 CCL16O15467 120 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 IRAK2O43187 625 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 ZRANB2O95218 330 aaKnown RBP eCLIP8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 IGLV3-25P01717 112 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 ZDHHC11BP0C7U3 371 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 RARGP13631 454 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 CD46P15529 392 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 IL1R2P27930 398 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 HOXA9P31269 272 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 TUBP50607 506 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 NOVA1P51513 510 aaKnown RBP8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 AIF1P55008 147 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 PITX1P78337 314 aaPredicted RBP8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 SATB1Q01826 763 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 ZNF211Q13398 564 aaPredicted RBP8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 NNTQ13423 1086 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 CCDC6Q16204 474 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 SMTNL2Q2TAL5 461 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 BOLA3Q53S33 107 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 ERMARDQ5T6L9 678 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 SNX30Q5VWJ9 437 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 HEATR6Q6AI08 1181 aaKnown RBP8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 TXNRD3NBQ6F5E7 133 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 CYP4V2Q6ZWL3 525 aaPredicted RBP8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 DNAJB7Q7Z6W7 309 aaPredicted RBP8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 FAM131BQ86XD5 332 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 CREG2Q8IUH2 290 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 PSTKQ8IV42 348 aaKnown RBP8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 NPAS3Q8IXF0 933 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 RCOR2Q8IZ40 523 aa8.89□□□□□ -0.99
KLHDC4-220ENST00000568338 ADAM32Q8TC27 787 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms