RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 HHIPQ96QV1 700 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 DNAJC7Q99615 494 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 TRIM7Q9C029 511 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 CIPCQ9C0C6 399 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 PARVAQ9NVD7 372 aa13.44□□□□□ -0.26
CNOT1-213ENST00000568158 TYW5A2RUC4 315 aaKnown RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 TMEM191CA6NGB0 347 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 SRGAP2O75044 1071 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 MFAP3LO75121 409 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 CNTN5O94779 1100 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 LUC7L3O95232 432 aaKnown RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 PABPC1P11940 636 aaKnown RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 NTSR1P30989 418 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 NUMBP49757 651 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ZNF143P52747 638 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 GFPT1Q06210 699 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 LMAN2Q12907 356 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 CRY1Q16526 586 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 TSR1Q2NL82 804 aaKnown RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 EOGTQ5NDL2 527 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ARTNQ5T4W7 220 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 SCYL2Q6P3W7 929 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ALKBH5Q6P6C2 394 aaKnown RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ANKS1BQ7Z6G8 1248 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ADIPOR2Q86V24 386 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ZNF683Q8IZ20 524 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 CCAR2Q8N163 923 aaKnown RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 CYB5D2Q8WUJ1 264 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ACDQ96AP0 544 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 C1orf74Q96LT6 269 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 RPRD1AQ96P16 312 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 HAPLN3Q96S86 360 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 THAP2Q9H0W7 228 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ABHD10Q9NUJ1 306 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ZNHIT6Q9NWK9 470 aaKnown RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ZSCAN32Q9NX65 697 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 CACNA2D2Q9NY47 1150 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 GGA2Q9UJY4 613 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 INTS6Q9UL03 887 aaKnown RBP13.43□□□□□ -0.26
CNOT1-213ENST00000568158 PAXBP1Q9Y5B6 917 aa13.43□□□□□ -0.26
CNOT1-213ENST00000568158 ANKRD62A6NC57 917 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 DRGXA6NNA5 263 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 TIMM44O43615 452 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 GALCP54803 685 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 NRLP54845 237 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 SRSF5Q13243 272 aaKnown RBP13.42□□□□□ -0.26
CNOT1-213ENST00000568158 ZNF234Q14588 700 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 ASTE1Q2TB18 679 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-213ENST00000568158 C5orf22Q49AR2 442 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 HSF5Q4G112 596 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-213ENST00000568158 ALFQ53S48 1182 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 RABGAP1LQ5R372 815 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 MBLAC2Q68D91 279 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 SDE2Q6IQ49 451 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 CCDC117Q8IWD4 279 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-213ENST00000568158 CHPFQ8IZ52 775 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 APCDD1Q8J025 514 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 CAMKK1Q8N5S9 505 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 CCDC185Q8N715 623 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.42□□□□□ -0.26
CNOT1-213ENST00000568158 ZBTB44Q8NCP5 570 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 OR52K2Q8NGK3 314 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 UCMAQ8WVF2 138 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 ATRIPQ8WXE1 791 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 ARHGEF26Q96DR7 871 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 CNPY3Q9BT09 278 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 TMEM51Q9NW97 253 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 MPP6Q9NZW5 540 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 KIAA1522Q9P206 1035 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-213ENST00000568158 THAP10Q9P2Z0 257 aaPredicted RBP13.42□□□□□ -0.26
CNOT1-213ENST00000568158 NENFQ9UMX5 172 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 RAD54BQ9Y620 910 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 STON1Q9Y6Q2 735 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 MUC6Q6W4X9 2439 aa13.42□□□□□ -0.26
CNOT1-213ENST00000568158 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.41□□□□□ -0.26
CNOT1-213ENST00000568158 E9PAM4 449 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 FAM72CH0Y354 149 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 HRO43593 1189 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 HOXB2P14652 356 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 POLR2EP19388 210 aaKnown RBP13.41□□□□□ -0.26
CNOT1-213ENST00000568158 PSMA2P25787 234 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 MZF1P28698 734 aaPredicted RBP13.41□□□□□ -0.26
CNOT1-213ENST00000568158 HOXA6P31267 233 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 NBL1P41271 181 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 IL12RB1P42701 662 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 DGKEP52429 567 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 MTA1Q13330 715 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 ZNF177Q13360 481 aaPredicted RBP13.41□□□□□ -0.26
CNOT1-213ENST00000568158 CDH18Q13634 790 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 ARL13BQ3SXY8 428 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 FUT11Q495W5 492 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 FAM72AQ5TYM5 149 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 FAM72DQ6L9T8 149 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 KIAA1211LQ6NV74 962 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 LRRC31Q6UY01 552 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 TRMT11Q7Z4G4 463 aaKnown RBP13.41□□□□□ -0.26
CNOT1-213ENST00000568158 LONP2Q86WA8 852 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 FAM72BQ86X60 149 aa13.41□□□□□ -0.26
CNOT1-213ENST00000568158 PYROXD2Q8N2H3 581 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms