RNA–Protein interactions for RNA: ENST00000567712.1

CNEP1R1-209, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-209ENST00000567712 LTFP02788 710 aa23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 CSKP41240 450 aa23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 GALCP54803 685 aa23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 TBX4P57082 545 aa23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 FKBP3Q00688 224 aaKnown RBP23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 CYP4F3Q08477 520 aa23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 SUZ12Q15022 739 aaKnown RBP23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 CCDC157Q569K6 752 aa23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 ZNF658Q5TYW1 1059 aaPredicted RBP23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 MFN1Q8IWA4 741 aa23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 DHX40Q8IX18 779 aaKnown RBP23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 FIBINQ8TAL6 211 aa23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 BBC3Q96PG8 261 aaPredicted RBP23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 SCAND2PQ9GZW5 306 aaPredicted RBP23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 NUCKS1Q9H1E3 243 aaKnown RBP23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 FBXL12Q9NXK8 326 aa23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 XPO7Q9UIA9 1087 aaKnown RBP23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 PCDHB4Q9Y5E5 795 aa23.79■■□□□ 1.4
CNEP1R1-209ENST00000567712 M0QYV0 167 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 CBX4O00257 560 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 MID1O15344 667 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 TNFSF14O43557 240 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 FMO5P49326 533 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 CCT8P50990 548 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 CLDN6P56747 220 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 YWHAEP62258 255 aaKnown RBP23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 KCNJ12Q14500 433 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 SHBQ15464 509 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 CNGA2Q16280 664 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 COBLL1Q53SF7 1204 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 C9orf64Q5T6V5 341 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 GATAD2AQ86YP4 633 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 UNC45BQ8IWX7 931 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 FMR1NBQ8N0W7 255 aaPredicted RBP23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 CFAP52Q8N1V2 620 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 LMO3Q8TAP4 145 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 IRGQQ8WZA9 623 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 CRELD1Q96HD1 420 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 NEUROG2Q9H2A3 272 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 DKK4Q9UBT3 224 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 ARMCX3Q9UH62 379 aaPredicted RBP23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 KIAA1257Q9ULG3 409 aa23.78■■□□□ 1.4
CNEP1R1-209ENST00000567712 COL5A1P20908 1838 aaPredicted RBP23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 A0A1W2PP55 124 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 TTC34A8MYJ7 566 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 PAEPP09466 180 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 TBXAS1P24557 533 aaPredicted RBP23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 GRK6P43250 576 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 SLC11A2P49281 568 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 HNRNPA1L2Q32P51 320 aaKnown RBP23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 TTC31Q49AM3 519 aaPredicted RBP23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 NUGGCQ68CJ6 796 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 NCEH1Q6PIU2 408 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 DHRS13Q6UX07 377 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 CARNMT1Q8N4J0 409 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 ADAM32Q8TC27 787 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 DQX1Q8TE96 717 aaKnown RBP23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 GOLGA1Q92805 767 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 AZIN2Q96A70 460 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 TSG101Q99816 390 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 MIS12Q9H081 205 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 NAALADL1Q9UQQ1 740 aa23.77■■□□□ 1.4
CNEP1R1-209ENST00000567712 A0A1B0GTQ1 180 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 A0A1W2PPC4 97 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 IRAK2O43187 625 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 NUMBP49757 651 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 SMAD1Q15797 465 aaKnown RBP23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 MS4A13Q5J8X5 152 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 USP30Q70CQ3 517 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 MMAAQ8IVH4 418 aaKnown RBP23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 HJURPQ8NCD3 748 aaPredicted RBP23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 GANCQ8TET4 914 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 SLC39A13Q96H72 371 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 SLCO3A1Q9UIG8 710 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 ERVW-1Q9UQF0 538 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 SHROOM3Q8TF72 1996 aa23.76■■□□□ 1.39
CNEP1R1-209ENST00000567712 VILLO15195 856 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 PAPSS1O43252 624 aaPredicted RBP23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 RACK1P63244 317 aaKnown RBP23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 CST6Q15828 149 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 DCAF6Q58WW2 860 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 PITRM1Q5JRX3 1037 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 RRAGAQ7L523 313 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 ADAT2Q7Z6V5 191 aaKnown RBP23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 ARHGEF19Q8IW93 802 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 SCUBE3Q8IX30 993 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 APCDD1Q8J025 514 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 SPATA20Q8TB22 786 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 LRIG1Q96JA1 1093 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 FAM129BQ96TA1 746 aa23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 IRX2Q9BZI1 471 aaPredicted RBP23.75■■□□□ 1.39
CNEP1R1-209ENST00000567712 CD44P16070 742 aaKnown RBP23.74■■□□□ 1.39
CNEP1R1-209ENST00000567712 SYPL2Q5VXT5 272 aa23.74■■□□□ 1.39
CNEP1R1-209ENST00000567712 PPM1KQ8N3J5 372 aa23.74■■□□□ 1.39
CNEP1R1-209ENST00000567712 GALNT15Q8N3T1 639 aa23.74■■□□□ 1.39
CNEP1R1-209ENST00000567712 AADATQ8N5Z0 425 aa23.74■■□□□ 1.39
CNEP1R1-209ENST00000567712 ENGASEQ8NFI3 743 aa23.74■■□□□ 1.39
CNEP1R1-209ENST00000567712 HSFY1Q96LI6 401 aa23.74■■□□□ 1.39
CNEP1R1-209ENST00000567712 NT5C1BQ96P26 610 aa23.74■■□□□ 1.39
CNEP1R1-209ENST00000567712 GSDMAQ96QA5 445 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms