RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 NRIP3Q9NQ35 241 aa9.46□□□□□ -0.9
NIFKP4-201ENST00000567275 ATP10DQ9P241 1426 aa9.46□□□□□ -0.9
NIFKP4-201ENST00000567275 TAF1LQ8IZX4 1826 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 FGF18O76093 207 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 PRR35P0CG20 571 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 MST1P26927 711 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 SLC5A2P31639 672 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 KCNB1Q14721 858 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 LARS2Q15031 903 aaKnown RBP9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 ACOX1Q15067 660 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 IZUMO3Q5VZ72 239 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 GRHL2Q6ISB3 625 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 FBXO38Q6PIJ6 1188 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 VSTM1Q6UX27 236 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 KIAA0408Q6ZU52 694 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 YTHDF3Q7Z739 585 aaKnown RBP9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 KRT73Q86Y46 540 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 GRAMD1AQ96CP6 724 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 QTRT1Q9BXR0 403 aaKnown RBP9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 TMOD3Q9NYL9 352 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 CLSPNQ9HAW4 1339 aa9.45□□□□□ -0.9
NIFKP4-201ENST00000567275 ADAMTS3O15072 1205 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 HSP90AB1P08238 724 aaKnown RBP9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 KELP23276 732 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 GABRB3P28472 473 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 DGKQP52824 942 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 CCDC15Q0P6D6 951 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 MTAPQ13126 283 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 FHL3Q13643 280 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 MFSD13AQ14CX5 517 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 SLC35G1Q2M3R5 365 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 RAP1GAP2Q684P5 730 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 NEK8Q86SG6 692 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 SVIPQ8NHG7 77 aa9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 EDC3Q96F86 508 aaKnown RBP9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.44□□□□□ -0.9
NIFKP4-201ENST00000567275 ZNF831Q5JPB2 1677 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 IGSF1Q8N6C5 1336 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 DNAJC9-AS1A6NH13 148 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 ERVV-2B6SEH9 535 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 H3BNC9 293 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 ZSCAN9O15535 394 aaPredicted RBP9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 RNF8O76064 485 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 EGR1P18146 543 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 PBX1P40424 430 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 GPC5P78333 572 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 AWAT1Q58HT5 328 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 MTX3Q5HYI7 312 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 SLC18B1Q6NT16 456 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 C16orf71Q8IYS4 520 aaPredicted RBP9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 GALNT16Q8N428 558 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 EFHD1Q9BUP0 239 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 SLC29A3Q9BZD2 475 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 PDGFCQ9NRA1 345 aa9.43□□□□□ -0.9
NIFKP4-201ENST00000567275 UBR3Q6ZT12 1888 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 MAP2P11137 1827 aaKnown RBP9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 TOGARAM1Q9Y4F4 1720 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 CICQ96RK0 1608 aaPredicted RBP9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 KDRP35968 1356 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 FAM234BA2RU67 622 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 CLIC1O00299 241 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 EEF1GP26641 437 aaKnown RBP9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 ZNF268Q14587 947 aaPredicted RBP9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 SLC5A9Q2M3M2 681 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 CC2D1BQ5T0F9 858 aaKnown RBP9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 SRLQ86TD4 932 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 CNGA4Q8IV77 575 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 GLIS1Q8NBF1 620 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 GAR1Q9NY12 217 aaKnown RBP9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 RGL1Q9NZL6 768 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 POLKQ9UBT6 870 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 MAFFQ9ULX9 164 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 ITGB4P16144 1822 aa9.42□□□□□ -0.9
NIFKP4-201ENST00000567275 CEP350Q5VT06 3117 aa9.41□□□□□ -0.9
NIFKP4-201ENST00000567275 PODXLO00592 558 aa9.41□□□□□ -0.9
NIFKP4-201ENST00000567275 TMIGD3P0DMS9 266 aaPredicted RBP9.41□□□□□ -0.9
NIFKP4-201ENST00000567275 DRD1P21728 446 aa9.41□□□□□ -0.9
NIFKP4-201ENST00000567275 ARHGAP15Q53QZ3 475 aa9.41□□□□□ -0.9
NIFKP4-201ENST00000567275 ZNF813Q6ZN06 617 aa9.41□□□□□ -0.9
NIFKP4-201ENST00000567275 WDR24Q96S15 920 aa9.41□□□□□ -0.9
NIFKP4-201ENST00000567275 FZD4Q9ULV1 537 aa9.41□□□□□ -0.9
NIFKP4-201ENST00000567275 PRAMEF2O60811 474 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 LDHAP00338 332 aaKnown RBP9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 VIPP01282 170 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 PECAM1P16284 738 aaPredicted RBP9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 ARHGAP25P42331 645 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 ITPK1Q13572 414 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 DNASE1L3Q13609 305 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 ATP1A4Q13733 1029 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 SUPT20HL1Q3ZLR7 823 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 AASDHQ4L235 1098 aaPredicted RBP9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 ZNF626Q68DY1 528 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 RANBP10Q6VN20 620 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 GDF15Q99988 308 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 FAM118BQ9BPY3 351 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 ADGRE3Q9BY15 652 aa9.4□□□□□ -0.9
NIFKP4-201ENST00000567275 SAP30LQ9HAJ7 183 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms