RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SGSHP51688 502 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 TAS2R40P59535 323 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 GAD2Q05329 585 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 NR1H3Q13133 447 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 AUHQ13825 339 aaKnown RBP11.85□□□□□ -0.51
KARS-207ENST00000566560 MPPE1Q53F39 396 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 RABGAP1LQ5R372 815 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 ACBD5Q5T8D3 534 aaPredicted RBP11.85□□□□□ -0.51
KARS-207ENST00000566560 TTC39BQ5VTQ0 682 aaPredicted RBP11.85□□□□□ -0.51
KARS-207ENST00000566560 TXNRD3NBQ6F5E7 133 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 FBXL22Q6P050 247 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 TMEM25Q86YD3 366 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 UBALD2Q8IYN6 164 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 ADGRG2Q8IZP9 1017 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 DDI1Q8WTU0 396 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 HSPH1Q92598 858 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 RPRD1AQ96P16 312 aaPredicted RBP11.85□□□□□ -0.51
KARS-207ENST00000566560 ALS2CR12Q96Q35 445 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 PRMT1Q99873 361 aaKnown RBP11.85□□□□□ -0.51
KARS-207ENST00000566560 DHX35Q9H5Z1 703 aaKnown RBP11.85□□□□□ -0.51
KARS-207ENST00000566560 TRPV5Q9NQA5 729 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 HEBP1Q9NRV9 189 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 KLHL11Q9NVR0 708 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 FBXL21Q9UKT6 434 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 PIAS3Q9Y6X2 628 aa11.85□□□□□ -0.51
KARS-207ENST00000566560 E9PAM4 449 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 GFRA2O00451 464 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 PSTPIP1O43586 416 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 TBL1XO60907 577 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 PALMO75781 387 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 PENKP01210 267 aaPredicted RBP11.84□□□□□ -0.51
KARS-207ENST00000566560 KRT7P08729 469 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 TNNT1P13805 278 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 TYRP14679 529 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 HOXD9P28356 352 aaPredicted RBP11.84□□□□□ -0.51
KARS-207ENST00000566560 SOX9P48436 509 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 RPS24P62847 133 aaKnown RBP11.84□□□□□ -0.51
KARS-207ENST00000566560 NRG1Q02297 640 aaPredicted RBP11.84□□□□□ -0.51
KARS-207ENST00000566560 CA9Q16790 459 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 KCNT1Q5JUK3 1230 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 ZFYVE27Q5T4F4 411 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 ERMARDQ5T6L9 678 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 FYB2Q5VWT5 728 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 RHBDF2Q6PJF5 856 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 LRRC31Q6UY01 552 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 POLNQ7Z5Q5 900 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 C14orf80Q86SX3 495 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 CIR1Q86X95 450 aaPredicted RBP11.84□□□□□ -0.51
KARS-207ENST00000566560 PSTKQ8IV42 348 aaKnown RBP11.84□□□□□ -0.51
KARS-207ENST00000566560 SYCE1Q8N0S2 351 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 PYROXD2Q8N2H3 581 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 RNF10Q8N5U6 811 aaKnown RBP11.84□□□□□ -0.51
KARS-207ENST00000566560 LRRC57Q8N9N7 239 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 TEKT4Q8WW24 435 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 TRIM44Q96DX7 344 aaPredicted RBP11.84□□□□□ -0.51
KARS-207ENST00000566560 MYEOVQ96EZ4 313 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 KCTD15Q96SI1 283 aaPredicted RBP11.84□□□□□ -0.51
KARS-207ENST00000566560 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
KARS-207ENST00000566560 OSBPL2Q9H1P3 480 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 ARHGEF3Q9NR81 526 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 PLK2Q9NYY3 685 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 OR12D3Q9UGF7 316 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 ALG6Q9Y672 507 aa11.84□□□□□ -0.51
KARS-207ENST00000566560 A0A1B0GVM2 712 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 GOLGA6L9A6NEM1 432 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 TCAF2A6NFQ2 919 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 SPECC1L-ADORA2AF8WAN1 911 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 FAM72CH0Y354 149 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 EEF2KO00418 725 aaKnown RBP11.83□□□□□ -0.52
KARS-207ENST00000566560 CREB3O43889 395 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 CACNG3O60359 315 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 SRGAP2O75044 1071 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 LRIG2O94898 1065 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 FTCDO95954 541 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 KRT1P04264 644 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 RARAP10276 462 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 L1CAMP32004 1257 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 CTHP32929 405 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 GJA4P35212 333 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 IRAK1P51617 712 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 MLLT6P55198 1093 aaPredicted RBP11.83□□□□□ -0.52
KARS-207ENST00000566560 TPI1P60174 286 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 MMRN1Q13201 1228 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 SEMA3BQ13214 749 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 CDH18Q13634 790 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 KRT81Q14533 505 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 MLF2Q15773 248 aaPredicted RBP11.83□□□□□ -0.52
KARS-207ENST00000566560 DPYSL2Q16555 572 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 BOLA3Q53S33 107 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 PPP6R3Q5H9R7 873 aaPredicted RBP11.83□□□□□ -0.52
KARS-207ENST00000566560 FAM72AQ5TYM5 149 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 MANEALQ5VSG8 457 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 LRRC38Q5VT99 294 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 FAM72DQ6L9T8 149 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 RWDD4Q6NW29 188 aaKnown RBP11.83□□□□□ -0.52
KARS-207ENST00000566560 TPRG1Q6ZUI0 275 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 C12orf40Q86WS4 652 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 FAM72BQ86X60 149 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 RHOT1Q8IXI2 618 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 ZNF683Q8IZ20 524 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms