RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 CCNFP41002 786 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 CDK16Q00536 496 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 SEMA3BQ13214 749 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 CHI3L2Q15782 390 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 ARL13BQ3SXY8 428 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 C16orf46Q6P387 395 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 ZCCHC23Q6ZST2 131 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 CLNKQ7Z7G1 428 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 TAC4Q86UU9 113 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 SCAMP5Q8TAC9 235 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 NTAN1Q96AB6 310 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 SLC9A7Q96T83 725 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 APOL2Q9BQE5 337 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 UBP1Q9NZI7 540 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 MARCOQ9UEW3 520 aaPredicted RBP19.21■□□□□ 0.67
MSLN-207ENST00000566549 ZBTB24O43167 697 aaPredicted RBP19.21■□□□□ 0.67
MSLN-207ENST00000566549 FAM163BP0C2L3 166 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 SRGAP2BP0DMP2 458 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 KITP10721 976 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 PGAM1P18669 254 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 SERPINB3P29508 390 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 BST1Q10588 318 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 LRRTM3Q86VH5 581 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 OR10T2Q8NGX3 314 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 ATXN7L3BQ96GX2 97 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 ADAM2Q99965 735 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 GORASP1Q9BQQ3 440 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 KCNK13Q9HB14 408 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 XPNPEP3Q9NQH7 507 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 EIF2B3Q9NR50 452 aaKnown RBP19.21■□□□□ 0.67
MSLN-207ENST00000566549 L3MBTL1Q9Y468 752 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 RPS6KL1Q9Y6S9 549 aa19.21■□□□□ 0.67
MSLN-207ENST00000566549 SF3B1O75533 1304 aaKnown RBP eCLIP19.21■□□□□ 0.66
MSLN-207ENST00000566549 RPL9P32969 192 aaKnown RBP19.2■□□□□ 0.66
MSLN-207ENST00000566549 GMPRP36959 345 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 ZBTB17Q13105 803 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 KCNA10Q16322 511 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 STEAP4Q687X5 459 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 PACS1Q6VY07 963 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 RASSF3Q86WH2 238 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 NUDCD3Q8IVD9 361 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 DNAAF3Q8N9W5 541 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 ZNF638Q14966 1978 aaKnown RBP19.2■□□□□ 0.66
MSLN-207ENST00000566549 C9IYK1 514 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 TPP1O14773 563 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 LRIG2O94898 1065 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 ZBTB16Q05516 673 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 NIPAL4Q0D2K0 466 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 SCAPQ12770 1279 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 CDKL2Q92772 493 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 E2F7Q96AV8 911 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 SIK2Q9H0K1 926 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 TRMT13Q9NUP7 481 aaKnown RBP19.2■□□□□ 0.66
MSLN-207ENST00000566549 ZFATQ9P243 1243 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 IGSF9Q9P2J2 1179 aa19.2■□□□□ 0.66
MSLN-207ENST00000566549 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.2■□□□□ 0.66
MSLN-207ENST00000566549 ALDH1A2O94788 518 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 ALDOAP04075 364 aaKnown RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 SLC10A3P09131 477 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 DLDP09622 509 aaKnown RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 MYL2P10916 166 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 SERPINB9P50453 376 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 GTF2A1P52655 376 aaPredicted RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 PRKCZQ05513 592 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 INTS6LQ5JSJ4 861 aaKnown RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 RWDD4Q6NW29 188 aaKnown RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 PDZD4Q76G19 769 aaPredicted RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 METTL23Q86XA0 190 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 STKLD1Q8NE28 680 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 AGAP11Q8TF27 550 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 SLC7A6OSQ96CW6 309 aaPredicted RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 LRMDAQ9H2I8 198 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 CCND3P30281 292 aaPredicted RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 CACNB2Q08289 660 aaPredicted RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 LPIN1Q14693 890 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 MRPL10Q7Z7H8 261 aaKnown RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 TTC7BQ86TV6 843 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 ZNF398Q8TD17 642 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 FCRL3Q96P31 734 aaPredicted RBP19.19■□□□□ 0.66
MSLN-207ENST00000566549 PRDM16Q9HAZ2 1276 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 NOD1Q9Y239 953 aa19.19■□□□□ 0.66
MSLN-207ENST00000566549 SEPT4O43236 478 aa19.18■□□□□ 0.66
MSLN-207ENST00000566549 ADAMTS4O75173 837 aa19.18■□□□□ 0.66
MSLN-207ENST00000566549 CD68P34810 354 aaPredicted RBP19.18■□□□□ 0.66
MSLN-207ENST00000566549 ABCG1P45844 678 aa19.18■□□□□ 0.66
MSLN-207ENST00000566549 AIF1P55008 147 aa19.18■□□□□ 0.66
MSLN-207ENST00000566549 CD300LGQ6UXG3 332 aa19.18■□□□□ 0.66
MSLN-207ENST00000566549 MARK2Q7KZI7 788 aaKnown RBP19.18■□□□□ 0.66
MSLN-207ENST00000566549 ARID3BQ8IVW6 561 aaPredicted RBP19.18■□□□□ 0.66
MSLN-207ENST00000566549 USP33Q8TEY7 942 aa19.18■□□□□ 0.66
MSLN-207ENST00000566549 ZNF669Q96BR6 464 aaPredicted RBP19.18■□□□□ 0.66
MSLN-207ENST00000566549 EPAS1Q99814 870 aa19.18■□□□□ 0.66
MSLN-207ENST00000566549 CSNK1G1Q9HCP0 422 aa19.18■□□□□ 0.66
MSLN-207ENST00000566549 NUDT5Q9UKK9 219 aa19.18■□□□□ 0.66
MSLN-207ENST00000566549 CCDC78A2IDD5 438 aa19.17■□□□□ 0.66
MSLN-207ENST00000566549 ATP9BO43861 1147 aa19.17■□□□□ 0.66
MSLN-207ENST00000566549 ATP5HO75947 161 aa19.17■□□□□ 0.66
MSLN-207ENST00000566549 NFKB1P19838 968 aa19.17■□□□□ 0.66
MSLN-207ENST00000566549 CRHR1P34998 444 aa19.17■□□□□ 0.66
MSLN-207ENST00000566549 PDE1BQ01064 536 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms