RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 LATO43561 262 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ENTPD3O75355 529 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SAT1P21673 171 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TECP42680 631 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 IREB2P48200 963 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 CYP2A13Q16696 494 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 MAMSTRQ6ZN01 415 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ADAT2Q7Z6V5 191 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 SLC15A4Q8N697 577 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 EFCAB3Q8N7B9 438 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 FRMD8Q9BZ67 464 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 GPR88Q9GZN0 384 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 OSGEPQ9NPF4 335 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.99□□□□□ -1.93
CHD9-218ENST00000566029 HCN3Q9P1Z3 774 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 EBF1Q9UH73 591 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CPSF3Q9UKF6 684 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 SQORQ9Y6N5 450 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CHD2O14647 1828 aaKnown RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 TNFRSF21O75509 655 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 PLS3P13797 630 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 STX1BP61266 288 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 TIGD2Q4W5G0 525 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 C1orf146Q5VVC0 180 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ANKRD26P1Q6NSI1 321 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 TMEM26Q6ZUK4 368 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 SLC35G2Q8TBE7 412 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 LARP4BQ92615 738 aaKnown RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 TMA16Q96EY4 203 aaKnown RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 CNBD2Q96M20 576 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 SLC29A1Q99808 456 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 CEP44Q9C0F1 390 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 WNT8AQ9H1J5 351 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 KLHL31Q9H511 634 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 RGPD1P0DJD0 1748 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 C2orf71A6NGG8 1288 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 MAFKO60675 156 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 LPXNO60711 386 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 KLHL2O95198 593 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 KRT6AP02538 564 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 KRT6BP04259 564 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 PDK1Q15118 436 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 GJB7Q6PEY0 223 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 BLOC1S5Q8TDH9 187 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 CIDECQ96AQ7 238 aaPredicted RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 KCNK16Q96T55 309 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 TEX12Q9BXU0 123 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 THAP2Q9H0W7 228 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 H3BUI4 141 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 SGK1O00141 431 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 MYL2P10916 166 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 IFI30P13284 250 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ADCY8P40145 1251 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 NCKAP1LP55160 1127 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 GALNT1Q10472 559 aaPredicted RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 GADL1Q6ZQY3 521 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ANKRD13BQ86YJ7 626 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ZNF248Q8NDW4 579 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 CALML4Q96GE6 196 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 EGFL8Q99944 293 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 NUDT12Q9BQG2 462 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 TRIM45Q9H8W5 580 aaPredicted RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 MCM9Q9NXL9 1143 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 COQ3Q9NZJ6 369 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 SH3BGRL2Q9UJC5 107 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 PMF1-BGLAPU3KQ54 211 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 PRR23D1E9PI22 279 aaPredicted RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 M0QX08 132 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 CKMP06732 381 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 SNRPA1P09661 255 aaKnown RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 PRR23D2P0DMB1 279 aaPredicted RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 CD53P19397 219 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 EPHA3P29320 983 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ETV3P41162 512 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ZYXQ15942 572 aaKnown RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 PCGF5Q86SE9 256 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 SETD3Q86TU7 594 aaPredicted RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 TERB1Q8NA31 727 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 NLRP7Q8WX94 980 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 GPKOWQ92917 476 aaPredicted RBP eCLIP2.98□□□□□ -1.932e-8■■■■■ 29.1
CHD9-218ENST00000566029 RMDN1Q96DB5 314 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 FEM1CQ96JP0 617 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 DACH2Q96NX9 599 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 KCNN3Q9UGI6 736 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 FMN2Q9NZ56 1722 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 A0A1W2PRQ8 180 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 GPC4O75487 556 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 YBX3P16989 372 aaKnown RBP eCLIP2.98□□□□□ -1.93
CHD9-218ENST00000566029 KCNA5P22460 613 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ARRB2P32121 409 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 ETV5P41161 510 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 GRM5P41594 1212 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 MAGEA2P43356 314 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 CDH15P55291 814 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 DGCR6Q14129 220 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 EFR3AQ14156 821 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 IFIT1BQ5T764 474 aaKnown RBP2.98□□□□□ -1.93
CHD9-218ENST00000566029 KRT74Q7RTS7 529 aa2.98□□□□□ -1.93
CHD9-218ENST00000566029 METTL3Q86U44 580 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms