RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PENKP01210 267 aaPredicted RBP13.03□□□□□ -0.32
SF3B3-206ENST00000565990 RARAP10276 462 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 ARSAP15289 507 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 HCAR3P49019 387 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 NAP1L1P55209 391 aaKnown RBP13.03□□□□□ -0.32
SF3B3-206ENST00000565990 TNK2Q07912 1038 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
SF3B3-206ENST00000565990 ITPRIPL2Q3MIP1 535 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 MPPE1Q53F39 396 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 MANEALQ5VSG8 457 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 FYB2Q5VWT5 728 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 TXNRD3NBQ6F5E7 133 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 FBXL22Q6P050 247 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 NT5DC3Q86UY8 548 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 UBALD2Q8IYN6 164 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 CHFRQ96EP1 664 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 TMA16Q96EY4 203 aaKnown RBP13.03□□□□□ -0.32
SF3B3-206ENST00000565990 MYEOVQ96EZ4 313 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 GTSE1Q9NYZ3 720 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 WNT16Q9UBV4 365 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 GUCA1BQ9UMX6 200 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 JRKLQ9Y4A0 524 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 CHD5Q8TDI0 1954 aa13.03□□□□□ -0.32
SF3B3-206ENST00000565990 MACROD2A1Z1Q3 448 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 FAM72CH0Y354 149 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 HOXC11O43248 304 aaPredicted RBP13.02□□□□□ -0.33
SF3B3-206ENST00000565990 NARSO43776 548 aaKnown RBP13.02□□□□□ -0.33
SF3B3-206ENST00000565990 PALMO75781 387 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 SASH3O75995 380 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 CYP17A1P05093 508 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 KRT7P08729 469 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 TCP1P17987 556 aaKnown RBP13.02□□□□□ -0.33
SF3B3-206ENST00000565990 IL4RP24394 825 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 HTR7P34969 479 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 GJA4P35212 333 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 ZNF135P52742 658 aaPredicted RBP13.02□□□□□ -0.33
SF3B3-206ENST00000565990 PFKPQ01813 784 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 GAD2Q05329 585 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 NR1H3Q13133 447 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 DPYSL2Q16555 572 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 CA9Q16790 459 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 ATP13A4Q4VNC1 1196 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 EFHC2Q5JST6 749 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 LY6G5CQ5SRR4 150 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 FAM72AQ5TYM5 149 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 RAP1GAP2Q684P5 730 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 FAM72DQ6L9T8 149 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 RFWD3Q6PCD5 774 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 DAAM2Q86T65 1068 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 FAM72BQ86X60 149 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 RHOT1Q8IXI2 618 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 SYCE1Q8N0S2 351 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 PYROXD2Q8N2H3 581 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 TTC16Q8NEE8 873 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 IGSF8Q969P0 613 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 NECAB3Q96P71 396 aaPredicted RBP13.02□□□□□ -0.33
SF3B3-206ENST00000565990 ALS2CR12Q96Q35 445 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 SNRNP25Q9BV90 132 aaKnown RBP13.02□□□□□ -0.33
SF3B3-206ENST00000565990 SIK2Q9H0K1 926 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 ZNF212Q9UDV6 495 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 AP4E1Q9UPM8 1137 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 SNX10Q9Y5X0 201 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 CAPN6Q9Y6Q1 641 aa13.02□□□□□ -0.33
SF3B3-206ENST00000565990 NUP205Q92621 2012 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 SHISA7A6NL88 538 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 E9PAM4 449 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 F5H5T6 163 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 LRIG2O94898 1065 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 SEC31AO94979 1220 aaKnown RBP13.01□□□□□ -0.33
SF3B3-206ENST00000565990 ADH1CP00326 375 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 CISD3P0C7P0 127 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 HOXC13P31276 330 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 PEX5P50542 639 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 SGSHP51688 502 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 SLC44A4Q53GD3 710 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 HSP90B2PQ58FF3 399 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 KCNT1Q5JUK3 1230 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 IER5LQ5T953 404 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 VSIG1Q86XK7 387 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 ETFBKMTQ8IXQ9 262 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 LGI2Q8N0V4 545 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 CPA6Q8N4T0 437 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 MMGT1Q8N4V1 131 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 CSGALNACT1Q8TDX6 532 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 DDI1Q8WTU0 396 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 PRICKLE1Q96MT3 831 aaPredicted RBP13.01□□□□□ -0.33
SF3B3-206ENST00000565990 SLC2A11Q9BYW1 496 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 TSPYL1Q9H0U9 437 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 GOLPH3Q9H4A6 298 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 ZWILCHQ9H900 591 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
SF3B3-206ENST00000565990 VANGL2Q9ULK5 521 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 NEU3Q9UQ49 428 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 HYOU1Q9Y4L1 999 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 PCDHA3Q9Y5H8 950 aa13.01□□□□□ -0.33
SF3B3-206ENST00000565990 BDP1A6H8Y1 2624 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 KIAA1549LQ6ZVL6 1849 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 C3orf70A6NLC5 250 aaPredicted RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 A6NNZ2 444 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 TMEM110-MUSTN1A8MSY1 372 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms