RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CALCAP01258 141 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 DNTTP04053 509 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 SERPINF2P08697 491 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 DESP17661 470 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 STAT1P42224 750 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 GFPT1Q06210 699 aaPredicted RBP17.3■□□□□ 0.36
USB1-211ENST00000565662 HSP90AA4PQ58FG1 418 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 ZC3H12AQ5D1E8 599 aaKnown RBP17.3■□□□□ 0.36
USB1-211ENST00000565662 TMEM215Q68D42 235 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 ZNF776Q68DI1 518 aaPredicted RBP17.3■□□□□ 0.36
USB1-211ENST00000565662 NADSYN1Q6IA69 706 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 LGI2Q8N0V4 545 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 CARNMT1Q8N4J0 409 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 WDTC1Q8N5D0 677 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 NEK11Q8NG66 645 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 ADAM32Q8TC27 787 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 EPS8L1Q8TE68 723 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 HSPA12BQ96MM6 686 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 NUCKS1Q9H1E3 243 aaKnown RBP17.3■□□□□ 0.36
USB1-211ENST00000565662 RETREG1Q9H6L5 497 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 ACP6Q9NPH0 428 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 WSB2Q9NYS7 404 aaPredicted RBP17.3■□□□□ 0.36
USB1-211ENST00000565662 STIM2Q9P246 746 aa17.3■□□□□ 0.36
USB1-211ENST00000565662 LIMA1Q9UHB6 759 aaKnown RBP17.3■□□□□ 0.36
USB1-211ENST00000565662 SDK1Q7Z5N4 2213 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 ITIH6Q6UXX5 1313 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 LRRC10BA6NIK2 292 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 SMTNL1A8MU46 457 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 LGALS16A8MUM7 142 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 MEI4A8MW99 385 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 CLDN11O75508 207 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 ERBB2P04626 1255 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 PRKCHP24723 683 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 SOX5P35711 763 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 TPMTP51580 245 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 COPAP53621 1224 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 HNRNPDQ14103 355 aaKnown RBP17.29■□□□□ 0.36
USB1-211ENST00000565662 SLC25A52Q3SY17 297 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 FAM102AQ5T9C2 384 aaPredicted RBP17.29■□□□□ 0.36
USB1-211ENST00000565662 LRRC31Q6UY01 552 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 USP30Q70CQ3 517 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 ERGIC2Q96RQ1 377 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 BPIFA3Q9BQP9 254 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 MKRN2Q9H000 416 aaKnown RBP17.29■□□□□ 0.36
USB1-211ENST00000565662 VPS16Q9H269 839 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 SGK2Q9HBY8 427 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 CLEC4EQ9ULY5 219 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 NCKAP1Q9Y2A7 1128 aa17.29■□□□□ 0.36
USB1-211ENST00000565662 EDDM13A0A1B0GTR0 161 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 ANTXRLA6NF34 631 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 WASH3PC4AMC7 463 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 M0QYT0 321 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 GDF9O60383 454 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 CD70P32970 193 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 CSKP41240 450 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 PTGER3P43115 390 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 COPB1P53618 953 aaKnown RBP17.28■□□□□ 0.36
USB1-211ENST00000565662 RPS24P62847 133 aaKnown RBP17.28■□□□□ 0.36
USB1-211ENST00000565662 ECT2LQ008S8 904 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 CDR2Q01850 454 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 APBA1Q02410 837 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 HNRNPA1L2Q32P51 320 aaKnown RBP17.28■□□□□ 0.36
USB1-211ENST00000565662 PLEKHG6Q3KR16 790 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 PPM1JQ5JR12 505 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 PITRM1Q5JRX3 1037 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 RAP1GAP2Q684P5 730 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 DPY19L2P1Q6NXN4 242 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 DSG4Q86SJ6 1040 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 RGL4Q8IZJ4 473 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 HDDC3Q8N4P3 179 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 NT5C3BQ969T7 300 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 P2RY11Q96G91 374 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 TOE1Q96GM8 510 aaKnown RBP17.28■□□□□ 0.36
USB1-211ENST00000565662 PCMTD1Q96MG8 357 aaPredicted RBP17.28■□□□□ 0.36
USB1-211ENST00000565662 RPRD1AQ96P16 312 aaPredicted RBP17.28■□□□□ 0.36
USB1-211ENST00000565662 GANQ9H2C0 597 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 SLC32A1Q9H598 525 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 WDCPQ9H6R7 721 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 MYO6Q9UM54 1294 aa17.28■□□□□ 0.36
USB1-211ENST00000565662 A0A1B0GTW7 788 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 GOLGA6L7A0A1B0GV03 622 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 UPK3BL1B0FP48 263 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 UPK3BL2E5RIL1 263 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 CFIP05156 583 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 ADRB1P08588 477 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 CSRP1P21291 193 aaKnown RBP17.27■□□□□ 0.36
USB1-211ENST00000565662 SGSHP51688 502 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 PLK1P53350 603 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 CDH4P55283 916 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 GSCP56915 257 aaPredicted RBP17.27■□□□□ 0.36
USB1-211ENST00000565662 POLR2FP61218 127 aaKnown RBP17.27■□□□□ 0.36
USB1-211ENST00000565662 NOMO3P69849 1222 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 NME3Q13232 169 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 SLC14A1Q13336 389 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 CCDC6Q16204 474 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 PTPRNQ16849 979 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 ARL13BQ3SXY8 428 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 FILIP1LQ4L180 1135 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 IL27RAQ6UWB1 636 aa17.27■□□□□ 0.36
USB1-211ENST00000565662 ARMCX6Q7L4S7 300 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms