RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 AP4E1Q9UPM8 1137 aa13.08□□□□□ -0.32
NSMCE1-208ENST00000565070 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 SRRM3A6NNA2 597 aaPredicted RBP13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 CCL16O15467 120 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 LTFP02788 710 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 HMGA1P17096 107 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 PTPN2P17706 415 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 USP46P62068 366 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 GUCY1A3Q02108 690 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 TAF10Q12962 218 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 ADGRE1Q14246 886 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 HFE2Q6ZVN8 426 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 CCDC185Q8N715 623 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 NAT8LQ8N9F0 302 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 STKLD1Q8NE28 680 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 FAM149B1Q96BN6 582 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 FAM161BQ96MY7 647 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 TTC25Q96NG3 672 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 GCNAQ96QF7 691 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 CDK5RAP1Q96SZ6 601 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 CNOT10Q9H9A5 744 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 USP29Q9HBJ7 922 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 POPDC2Q9HBU9 364 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 TRANK1O15050 2925 aa13.07□□□□□ -0.32
NSMCE1-208ENST00000565070 CCDC195A0A1B0GUA6 201 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 TLDC2A0PJX2 215 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 CFAP69A5D8W1 941 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 ALOX15BO15296 676 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 RFPL2O75678 378 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 FYNP06241 537 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 ZFXP17010 805 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 CDC25CP30307 473 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 RDXP35241 583 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 SULT1E1P49888 294 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 YWHAGP61981 247 aaKnown RBP eCLIP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 ADAM15Q13444 863 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 DCAF6Q58WW2 860 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 PPP6R3Q5H9R7 873 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 DARS2Q6PI48 645 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 TADA2BQ86TJ2 420 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 ZC3H18Q86VM9 953 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 KCTD15Q96SI1 283 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 DHX35Q9H5Z1 703 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 PIDD1Q9HB75 910 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 SAYSD1Q9NPB0 183 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 ABCC13Q9NSE7 274 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 TMEM51Q9NW97 253 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 RRN3Q9NYV6 651 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 CLIC5Q9NZA1 410 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 TRPM5Q9NZQ8 1165 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 RCOR3Q9P2K3 495 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 STAP1Q9ULZ2 295 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 LAMA3Q16787 3333 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 BCLAF3A2AJT9 711 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 YJEFN3A6XGL0 299 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 E7ENQ6 273 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 CAPN9O14815 690 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 IVLP07476 585 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 LSP1P33241 339 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 MMP13P45452 471 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 SLCO1A2P46721 670 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 EPHA5P54756 1037 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 PITX1P78337 314 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 STAT4Q14765 748 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 LONRF1Q17RB8 773 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 SNX30Q5VWJ9 437 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 BSPRYQ5W0U4 402 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 BTBD8Q5XKL5 378 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 TTC19Q6DKK2 380 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 ANKRD54Q6NXT1 300 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 C1orf228Q6PIY5 440 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 CENPUQ71F23 418 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 ZNF276Q8N554 614 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 VN1R2Q8NFZ6 395 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 SMG7Q92540 1137 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 C9orf72Q96LT7 481 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 CSPG4P5Q96PW8 444 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 CORO1BQ9BR76 489 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 PRDM16Q9HAZ2 1276 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 OLA1Q9NTK5 396 aaKnown RBP13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 GMIPQ9P107 970 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 FZD10Q9ULW2 581 aa13.06□□□□□ -0.32
NSMCE1-208ENST00000565070 SMIM23A6NLE4 172 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 ZNF197O14709 1029 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 GLP2RO95838 553 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 ZDHHC11BP0C7U3 371 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 NR2C2P49116 596 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 TUBP50607 506 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 IFI35P80217 286 aaPredicted RBP13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 CBLBQ13191 982 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 XRCC4Q13426 336 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 COL19A1Q14993 1142 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 CTC1Q2NKJ3 1217 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 ANKRD22Q5VYY1 191 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 PDZD4Q76G19 769 aaPredicted RBP13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 DEFB123Q8N688 67 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 PABPC5Q96DU9 382 aaKnown RBP13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 ZMYM5Q9UJ78 669 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 HEY1Q9Y5J3 304 aa13.05□□□□□ -0.32
NSMCE1-208ENST00000565070 DENND4CQ5VZ89 1909 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms