RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 GOLGA6L10A0A0M3HER8 536 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 ZNF487B1APH4 448 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 EEF2KO00418 725 aaKnown RBP11.45□□□□□ -0.58
SF3B3-205ENST00000564899 KRIT1O00522 736 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 TJP3O95049 919 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 SLU7O95391 586 aaKnown RBP11.45□□□□□ -0.58
SF3B3-205ENST00000564899 IRF1P10914 325 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 GOT1P17174 413 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 GGCXP38435 758 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 HARS2P49590 506 aaKnown RBP11.45□□□□□ -0.58
SF3B3-205ENST00000564899 ZNF135P52742 658 aaPredicted RBP11.45□□□□□ -0.58
SF3B3-205ENST00000564899 DYNLT1P63172 113 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 SLC7A9P82251 487 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 ITIH3Q06033 890 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 C2orf54Q08AI8 447 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 MTA1Q13330 715 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 TFDP2Q14188 446 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 CES5AQ6NT32 575 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 SIX5Q8N196 739 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 SPATA4Q8NEY3 305 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 ST13P5Q8NFI4 369 aaPredicted RBP11.45□□□□□ -0.58
SF3B3-205ENST00000564899 TSC1Q92574 1164 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 FAF2Q96CS3 445 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
SF3B3-205ENST00000564899 BTN2A3PQ96KV6 586 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 CNTNAP3BQ96NU0 1288 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 NECTIN4Q96NY8 510 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 CSPG4P5Q96PW8 444 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 CYP2S1Q96SQ9 504 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 AP1M1Q9BXS5 423 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 CNTNAP3Q9BZ76 1288 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 SIK2Q9H0K1 926 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 SLITRK6Q9H5Y7 841 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 TASP1Q9H6P5 420 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 GKN1Q9NS71 199 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 CWC15Q9P013 229 aaKnown RBP11.45□□□□□ -0.58
SF3B3-205ENST00000564899 XPO7Q9UIA9 1087 aaKnown RBP11.45□□□□□ -0.58
SF3B3-205ENST00000564899 EFR3BQ9Y2G0 817 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 CPQQ9Y646 472 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 HS3ST4Q9Y661 456 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 CACNA1IQ9P0X4 2223 aa11.45□□□□□ -0.58
SF3B3-205ENST00000564899 TCRBV7S2A1N4TA0A589 114 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 KRBA1A5PL33 1030 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 SOBPA7XYQ1 873 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 FAM72CH0Y354 149 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 DAPK3O43293 454 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 CST8O60676 142 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 STC2O76061 302 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 LRIG2O94898 1065 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 CEBPBP17676 345 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 IL4RP24394 825 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 CORO1AP31146 461 aaKnown RBP11.44□□□□□ -0.58
SF3B3-205ENST00000564899 AVPR1AP37288 418 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 MTHFRP42898 656 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 TPI1P60174 286 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 ADCY2Q08462 1091 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 SEMA3BQ13214 749 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 KLF1Q13351 362 aaPredicted RBP11.44□□□□□ -0.58
SF3B3-205ENST00000564899 ANKRD20A8PQ5CZ79 823 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 FAM72AQ5TYM5 149 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 PIK3R6Q5UE93 754 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 FAM72DQ6L9T8 149 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 RFX8Q6ZV50 586 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 BBS12Q6ZW61 710 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 DGLUCYQ7Z3D6 616 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 GPR149Q86SP6 731 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 FAM72BQ86X60 149 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 LRRN4CLQ8ND94 238 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 PCDH19Q8TAB3 1148 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 ING5Q8WYH8 240 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 RNF157Q96PX1 679 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 SLC46A2Q9BY10 475 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 OR12D3Q9UGF7 316 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 ZMYM5Q9UJ78 669 aa11.44□□□□□ -0.58
SF3B3-205ENST00000564899 MTCL1Q9Y4B5 1905 aaKnown RBP11.43□□□□□ -0.58
SF3B3-205ENST00000564899 E9PAM4 449 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 CCDC188H7C350 402 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 APOL1O14791 398 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 ACSL4O60488 711 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 ZFXP17010 805 aaPredicted RBP11.43□□□□□ -0.58
SF3B3-205ENST00000564899 AMPD1P23109 780 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 FSHRP23945 695 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 HTR7P34969 479 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 SLC11A2P49281 568 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 NRG1Q02297 640 aaPredicted RBP11.43□□□□□ -0.58
SF3B3-205ENST00000564899 DPYSQ14117 519 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 SIX1Q15475 284 aaPredicted RBP11.43□□□□□ -0.58
SF3B3-205ENST00000564899 MS4A13Q5J8X5 152 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 ACBD5Q5T8D3 534 aaPredicted RBP11.43□□□□□ -0.58
SF3B3-205ENST00000564899 MANEALQ5VSG8 457 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 RAP1GAP2Q684P5 730 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 RWDD4Q6NW29 188 aaKnown RBP11.43□□□□□ -0.58
SF3B3-205ENST00000564899 C14orf80Q86SX3 495 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 CHSY1Q86X52 802 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 DENND1CQ8IV53 801 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 CMTM8Q8IZV2 173 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 PQLC3Q8N755 202 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 PRELID2Q8N945 189 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 ITFG1Q8TB96 612 aa11.43□□□□□ -0.58
SF3B3-205ENST00000564899 HAUS1Q96CS2 278 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms