RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CCSER2Q9H7U1 834 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 ETNK1Q9HBU6 452 aa20.13■□□□□ 0.81
CLN6-205ENST00000564846 HBS1LQ9Y450 684 aaKnown RBP20.13■□□□□ 0.81
CLN6-205ENST00000564846 ZNF638Q14966 1978 aaKnown RBP20.13■□□□□ 0.81
CLN6-205ENST00000564846 ZNF840PA6NDX5 716 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 E7ESA3 106 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 RNF103O00237 685 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 PRRG1O14668 218 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 TEX28O15482 410 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 ABHD2P08910 425 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 ATP5C1P36542 298 aaKnown RBP20.12■□□□□ 0.81
CLN6-205ENST00000564846 FDFT1P37268 417 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 PPP3CCP48454 512 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 TUBP50607 506 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 ZNF33AQ06730 810 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 PDIA2Q13087 525 aaKnown RBP20.12■□□□□ 0.81
CLN6-205ENST00000564846 CBLBQ13191 982 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 TAF12Q16514 161 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 PIK3R6Q5UE93 754 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 KLHDC10Q6PID8 442 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 SP7Q8TDD2 431 aaPredicted RBP20.12■□□□□ 0.81
CLN6-205ENST00000564846 EXOC4Q96A65 974 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 C9orf72Q96LT7 481 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 ROPN1BQ9BZX4 212 aaPredicted RBP20.12■□□□□ 0.81
CLN6-205ENST00000564846 ROPN1Q9HAT0 212 aaPredicted RBP20.12■□□□□ 0.81
CLN6-205ENST00000564846 DNMT3LQ9UJW3 386 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 SLC4A7Q9Y6M7 1214 aa20.12■□□□□ 0.81
CLN6-205ENST00000564846 MKI67P46013 3256 aaKnown RBP20.12■□□□□ 0.81
CLN6-205ENST00000564846 GARSP41250 739 aaKnown RBP20.11■□□□□ 0.81
CLN6-205ENST00000564846 ARTNQ5T4W7 220 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 AGBL2Q5U5Z8 902 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 TP53INP2Q8IXH6 220 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 ZBED8Q8IZ13 594 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 NETO2Q8NC67 525 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 UHMK1Q8TAS1 419 aaKnown RBP20.11■□□□□ 0.81
CLN6-205ENST00000564846 FAM76AQ8TAV0 307 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 CENPHQ9H3R5 247 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 DONSONQ9NYP3 566 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 TRPM5Q9NZQ8 1165 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 PPARGC1AQ9UBK2 798 aaKnown RBP20.11■□□□□ 0.81
CLN6-205ENST00000564846 WASH4PA8MWX3 477 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 METTL18O95568 372 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 APRTP07741 180 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 TPSB2P20231 275 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 EPHB3P54753 998 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 COG7P83436 770 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 GAD2Q05329 585 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 WASHC5Q12768 1159 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 SEMA5AQ13591 1074 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 TPSAB1Q15661 275 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 MS4A13Q5J8X5 152 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 FNBP1LQ5T0N5 605 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 HECTD3Q5T447 861 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 C6orf118Q5T5N4 469 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 NUGGCQ68CJ6 796 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 LRRC31Q6UY01 552 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 KLHL23Q8NBE8 558 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 INSL5Q9Y5Q6 135 aa20.11■□□□□ 0.81
CLN6-205ENST00000564846 KIAA1671Q9BY89 1806 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 TWF1Q12792 350 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 PLD1Q13393 1074 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 KCTD16Q68DU8 428 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 C14orf80Q86SX3 495 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 RTL3Q8N8U3 475 aaKnown RBP20.1■□□□□ 0.81
CLN6-205ENST00000564846 MCUQ8NE86 351 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 PGM2Q96G03 612 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 VAT1Q99536 393 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 CCDC77Q9BR77 488 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 NACA2Q9H009 215 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 SEPT10Q9P0V9 454 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 UXTQ9UBK9 157 aaPredicted RBP20.1■□□□□ 0.81
CLN6-205ENST00000564846 NR2E3Q9Y5X4 410 aa20.1■□□□□ 0.81
CLN6-205ENST00000564846 E7EVH7 732 aa20.09■□□□□ 0.81
CLN6-205ENST00000564846 RASGRF2O14827 1237 aa20.09■□□□□ 0.81
CLN6-205ENST00000564846 TLL1O43897 1013 aa20.09■□□□□ 0.81
CLN6-205ENST00000564846 TCEA3O75764 348 aa20.09■□□□□ 0.81
CLN6-205ENST00000564846 ATP2A2P16615 1042 aaKnown RBP20.09■□□□□ 0.81
CLN6-205ENST00000564846 GABPB1Q06547 395 aaPredicted RBP20.09■□□□□ 0.81
CLN6-205ENST00000564846 AUHQ13825 339 aaKnown RBP20.09■□□□□ 0.81
CLN6-205ENST00000564846 FASTKD3Q14CZ7 662 aaKnown RBP20.09■□□□□ 0.81
CLN6-205ENST00000564846 PARP6Q2NL67 630 aa20.09■□□□□ 0.81
CLN6-205ENST00000564846 FAXCQ5TGI0 409 aa20.09■□□□□ 0.81
CLN6-205ENST00000564846 DNAJB7Q7Z6W7 309 aaPredicted RBP20.09■□□□□ 0.81
CLN6-205ENST00000564846 ZNF683Q8IZ20 524 aa20.09■□□□□ 0.81
CLN6-205ENST00000564846 PYROXD1Q8WU10 500 aa20.09■□□□□ 0.81
CLN6-205ENST00000564846 MTIF3Q9H2K0 278 aaKnown RBP20.09■□□□□ 0.81
CLN6-205ENST00000564846 ADAM21Q9UKJ8 722 aa20.09■□□□□ 0.81
CLN6-205ENST00000564846 ZMYND8Q9ULU4 1186 aaPredicted RBP20.09■□□□□ 0.81
CLN6-205ENST00000564846 IGLV3-10A0A075B6K4 115 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 A0A087WUV0 522 aaPredicted RBP20.08■□□□□ 0.81
CLN6-205ENST00000564846 CNPP09543 421 aaKnown RBP20.08■□□□□ 0.81
CLN6-205ENST00000564846 RHOQP17081 205 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 GYS2P54840 703 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 CDK16Q00536 496 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 STAT4Q14765 748 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 ITIH5Q86UX2 942 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 CCDC13Q8IYE1 715 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 ZNF567Q8N184 647 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 PSMG2Q969U7 264 aa20.08■□□□□ 0.81
CLN6-205ENST00000564846 CELF6Q96J87 481 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms