RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CITO14578 2027 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 KIAA1217Q5T5P2 1943 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TK2O00142 265 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CTPS1P17812 591 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CD52P31358 61 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TMED2Q15363 201 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 FAM102AQ5T9C2 384 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 EMC10Q5UCC4 262 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CCNI2Q6ZMN8 369 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 LRGUKQ96M69 825 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TDRD1Q9BXT4 1180 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 EPB41L4BQ9H329 900 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 LATS2Q9NRM7 1088 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ADAM22Q9P0K1 906 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 C6orf203Q9P0P8 240 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 NOCTQ9UK39 431 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 EVPLQ92817 2033 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 MGAMO43451 1857 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 RRN3P2A6NIE6 340 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SLC9A3R1O14745 358 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 S100GP29377 79 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 RFTN2Q52LD8 501 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 HYIQ5T013 277 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 PPP4R4Q6NUP7 873 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TAPT1Q6NXT6 567 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZBED8Q8IZ13 594 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CFAP52Q8N1V2 620 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 LEMD2Q8NC56 503 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 FAM174AQ8TBP5 190 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 REPS1Q96D71 796 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 EXOC2Q96KP1 924 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SLCO1B3Q9NPD5 702 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 KANSL3Q9P2N6 904 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 NAALADL1Q9UQQ1 740 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SLC16A3O15427 465 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 ESRRBO95718 433 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 LSM8O95777 96 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 NR4A1P22736 598 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CPA2P48052 419 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZNF280AP59817 542 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 TRIM60Q495X7 471 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 RALGPS1Q5JS13 557 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 UNQ6126/PRO20091Q6UXV3 157 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TLK2Q86UE8 772 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TMEM173Q86WV6 379 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 UNC45BQ8IWX7 931 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SH3RF2Q8TEC5 729 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 EFHD2Q96C19 240 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 MARK4Q96L34 752 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 PEBP4Q96S96 227 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 LGMNQ99538 433 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ARHGEF38Q9NXL2 777 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SIX4Q9UIU6 781 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 DCTN4Q9UJW0 460 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 KRT1P04264 644 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 WEE1P30291 646 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SCNN1GP51170 649 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 MAXP61244 160 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ACVR2BQ13705 512 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 DDR2Q16832 855 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CELF3Q5SZQ8 465 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 PMF1Q6P1K2 205 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZNF662Q6ZS27 426 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SLC30A8Q8IWU4 369 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CTAGE3PQ8IX95 158 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CCDC185Q8N715 623 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CCNYQ8ND76 341 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 KCNN1Q92952 543 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 UBE2E3Q969T4 207 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 PRR11Q96HE9 360 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 PRICKLE1Q96MT3 831 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 CYLDQ9NQC7 956 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.44□□□□□ -1.86
CHD9-213ENST00000564845 PSD3Q9NYI0 1048 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 IPPQ9Y573 584 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CFAP73A6NFT4 308 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 FKBP9O95302 570 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CD63P08962 238 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 PPP3CCP48454 512 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 RENBPP51606 427 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 GPC3P51654 580 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ACTN3Q08043 901 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 DBPQ10586 325 aaPredicted RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 MORF4L2Q15014 288 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 ZSCAN26Q16670 478 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SLC10A6Q3KNW5 377 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 PRPF39Q86UA1 669 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 EID3Q8N140 333 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 SIX6OS1Q8N1H7 587 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 CEP70Q8NHQ1 597 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 DDX1Q92499 740 aaKnown RBP3.44□□□□□ -1.86
CHD9-213ENST00000564845 IRF2BPLQ9H1B7 796 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 RNF186Q9NXI6 227 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 TMEM59LQ9UK28 342 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 AP1M2Q9Y6Q5 423 aa3.44□□□□□ -1.86
CHD9-213ENST00000564845 USP1O94782 785 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 MYO1DO94832 1006 aa3.43□□□□□ -1.86
CHD9-213ENST00000564845 SRPRAP08240 638 aaKnown RBP3.43□□□□□ -1.86
CHD9-213ENST00000564845 PRSS56P0CW18 603 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms