RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ZBTB11O95625 1053 aaPredicted RBP16.7■□□□□ 0.26
LINC00554-201ENST00000564841 CYP2C8P10632 490 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 ZNF23P17027 643 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 DPP6P42658 865 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 PRAMEP78395 509 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 Q3C1V9 767 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 DNAJC24Q6P3W2 148 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 TAS1R3Q7RTX0 852 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 DEPTORQ8TB45 409 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 SPATA18Q8TC71 538 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 KCNN1Q92952 543 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 COX4I2Q96KJ9 171 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 CALN1Q9BXU9 219 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 COQ10BQ9H8M1 238 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 ARHGAP26Q9UNA1 814 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 ATE1O95260 518 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 PSAPP07602 524 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 RFC1P35251 1148 aaPredicted RBP16.7■□□□□ 0.26
LINC00554-201ENST00000564841 CEACAM7Q14002 265 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 MAP7D1Q3KQU3 841 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 RAB6CQ53S08 254 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 DPH6Q7L8W6 267 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 TMEM110Q86TL2 294 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 C12orf43Q96C57 262 aaKnown RBP16.7■□□□□ 0.26
LINC00554-201ENST00000564841 MARK4Q96L34 752 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 C12orf42Q96LP6 360 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 NLRP4Q96MN2 994 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 OR52B2Q96RD2 323 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 TARS2Q9BW92 718 aaKnown RBP16.7■□□□□ 0.26
LINC00554-201ENST00000564841 HAPLN2Q9GZV7 340 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 RAB6CQ9H0N0 254 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 POLR3FQ9H1D9 316 aaPredicted RBP16.7■□□□□ 0.26
LINC00554-201ENST00000564841 WDR55Q9H6Y2 383 aaPredicted RBP16.7■□□□□ 0.26
LINC00554-201ENST00000564841 SCINQ9Y6U3 715 aa16.7■□□□□ 0.26
LINC00554-201ENST00000564841 KIAA1217Q5T5P2 1943 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 ENO3P13929 434 aaPredicted RBP16.69■□□□□ 0.26
LINC00554-201ENST00000564841 SFNP31947 248 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 GRIA1P42261 906 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 KLF10Q13118 480 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 TMEM214Q6NUQ4 689 aaKnown RBP16.69■□□□□ 0.26
LINC00554-201ENST00000564841 DCDC5Q6ZRR9 648 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 JOSD2Q8TAC2 188 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 ATP6V0A1Q93050 837 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 ATP6V1E2Q96A05 226 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 GPRASP2Q96D09 838 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 SLC29A1Q99808 456 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 SLC2A11Q9BYW1 496 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 SPATC1LQ9H0A9 340 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 PSMD12O00232 456 aaPredicted RBP16.69■□□□□ 0.26
LINC00554-201ENST00000564841 ZNF195O14628 629 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 RPL26P61254 145 aaKnown RBP16.69■□□□□ 0.26
LINC00554-201ENST00000564841 WDR44Q5JSH3 913 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 IL23RQ5VWK5 629 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 MAP1SQ66K74 1059 aaPredicted RBP16.69■□□□□ 0.26
LINC00554-201ENST00000564841 SLC9A4Q6AI14 798 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 DARS2Q6PI48 645 aaKnown RBP16.69■□□□□ 0.26
LINC00554-201ENST00000564841 SNX32Q86XE0 403 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 PHF13Q86YI8 300 aaPredicted RBP16.69■□□□□ 0.26
LINC00554-201ENST00000564841 CENPSQ8N2Z9 138 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 GPD1LQ8N335 351 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 ZNF606Q8WXB4 792 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 EME1Q96AY2 570 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 KCNK16Q96T55 309 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 NAA50Q9GZZ1 169 aaKnown RBP16.69■□□□□ 0.26
LINC00554-201ENST00000564841 SSX2IPQ9Y2D8 614 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 TSC22D4Q9Y3Q8 395 aa16.69■□□□□ 0.26
LINC00554-201ENST00000564841 APRTP07741 180 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 MMP8P22894 467 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 EPHX2P34913 555 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 USP41Q3LFD5 358 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 SLC2A7Q6PXP3 512 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 MAP4K3Q8IVH8 894 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 RAVER1Q8IY67 606 aaKnown RBP16.68■□□□□ 0.26
LINC00554-201ENST00000564841 TNS4Q8IZW8 715 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 TMEM79Q9BSE2 394 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 POPDC2Q9HBU9 364 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 THEGQ9P2T0 379 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 STK39Q9UEW8 545 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 ADAMTS5Q9UNA0 930 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 A0A1W2PPW3 197 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 ARHGEF37A1IGU5 675 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 PMM2O15305 246 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 EDN1P05305 212 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 TMED10P49755 219 aaKnown RBP16.68■□□□□ 0.26
LINC00554-201ENST00000564841 EIF2B2P49770 351 aaKnown RBP16.68■□□□□ 0.26
LINC00554-201ENST00000564841 CRADDP78560 199 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 PDCD4Q53EL6 469 aaKnown RBP16.68■□□□□ 0.26
LINC00554-201ENST00000564841 LBX2Q6XYB7 198 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 UNC5AQ6ZN44 842 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 NANOGNBQ7Z5D8 188 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 CHERPQ8IWX8 916 aaKnown RBP16.68■□□□□ 0.26
LINC00554-201ENST00000564841 ISOC1Q96CN7 298 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 PGLYRP2Q96PD5 576 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 PPP1R16BQ96T49 567 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 GPATCH1Q9BRR8 931 aaKnown RBP16.68■□□□□ 0.26
LINC00554-201ENST00000564841 COG4Q9H9E3 785 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 OLAHQ9NV23 265 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 MAP3K20Q9NYL2 800 aaKnown RBP16.68■□□□□ 0.26
LINC00554-201ENST00000564841 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
LINC00554-201ENST00000564841 DOCK1Q14185 1865 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms