RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 ASB5Q8WWX0 329 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 ATP2A3Q93084 1043 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 PAAF1Q9BRP4 392 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 ELOVL1Q9BW60 279 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 KCNK9Q9NPC2 374 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 HELLSQ9NRZ9 838 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 PLK2Q9NYY3 685 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 RGL1Q9NZL6 768 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 WNT16Q9UBV4 365 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 PCDHA7Q9UN72 937 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 B3GNT3Q9Y2A9 372 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 MAPKBP1O60336 1514 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 KIAA0586Q9BVV6 1533 aa4.86□□□□□ -1.63
CHD9-212ENST00000564641 RHODO00212 210 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 PPP6R2O75170 966 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 KLKB1P03952 638 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 SRGAP2BP0DMP2 458 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 ARRB2P32121 409 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 MLH1P40692 756 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 EGR4Q05215 589 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 GAD2Q05329 585 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 ASIC2Q16515 512 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 ARL13BQ3SXY8 428 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 CCDC181Q5TID7 509 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 WDR93Q6P2C0 686 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 CYB5R4Q7L1T6 521 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 RASGRP3Q8IV61 690 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 WDR75Q8IWA0 830 aaKnown RBP4.85□□□□□ -1.63
CHD9-212ENST00000564641 BRI3BPQ8WY22 251 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 TIFAQ96CG3 184 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 GPR78Q96P69 363 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 ABHD14AQ9BUJ0 271 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 MYLK2Q9H1R3 596 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 PROCRQ9UNN8 238 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 MAN2B2Q9Y2E5 1009 aa4.85□□□□□ -1.63
CHD9-212ENST00000564641 RUSC2Q8N2Y8 1516 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 ABCC10Q5T3U5 1492 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 RPS10-NUDT3A0A1W2PQS6 291 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 ACOT8O14734 319 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 MDM4O15151 490 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 CNTN5O94779 1100 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 PECAM1P16284 738 aaPredicted RBP4.84□□□□□ -1.63
CHD9-212ENST00000564641 MT3P25713 68 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 RFX2P48378 723 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 KRTAP10-7P60409 375 aaPredicted RBP4.84□□□□□ -1.63
CHD9-212ENST00000564641 ARHGAP15Q53QZ3 475 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 NUGGCQ68CJ6 796 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 SLC39A5Q6ZMH5 540 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 DPP9Q86TI2 863 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 DCP1BQ8IZD4 617 aaKnown RBP4.84□□□□□ -1.63
CHD9-212ENST00000564641 TXLNBQ8N3L3 684 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 PAQR4Q8N4S7 273 aaPredicted RBP4.84□□□□□ -1.63
CHD9-212ENST00000564641 MIB2Q96AX9 1013 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 EME1Q96AY2 570 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 FAM84BQ96KN1 310 aaPredicted RBP4.84□□□□□ -1.63
CHD9-212ENST00000564641 GDF15Q99988 308 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.84□□□□□ -1.63
CHD9-212ENST00000564641 SFXN1Q9H9B4 322 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 KLHL42Q9P2K6 505 aa4.84□□□□□ -1.63
CHD9-212ENST00000564641 C3orf70A6NLC5 250 aaPredicted RBP4.83□□□□□ -1.64
CHD9-212ENST00000564641 A6NNC1 897 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 H0YGN5 161 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 TNFRSF13BO14836 293 aaPredicted RBP4.83□□□□□ -1.64
CHD9-212ENST00000564641 DHHO43323 396 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 GLP2RO95838 553 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 WNT1P04628 370 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 LCKP06239 509 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 CHRNB1P11230 501 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 PRIM2P49643 509 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 KIAA1755Q5JYT7 1200 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 ARL6IP4Q66PJ3 421 aaKnown RBP4.83□□□□□ -1.64
CHD9-212ENST00000564641 MSANTD2Q6P1R3 559 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 TMEM88Q6PEY1 159 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 PARM1Q6UWI2 310 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 C16orf89Q6UX73 402 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 C11orf96Q7Z7L8 435 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 SPATA2LQ8IUW3 424 aaPredicted RBP4.83□□□□□ -1.64
CHD9-212ENST00000564641 RBMXL3Q8N7X1 1067 aaKnown RBP4.83□□□□□ -1.64
CHD9-212ENST00000564641 GLIS1Q8NBF1 620 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 NPIPB3Q92617 1050 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 AAMDCQ9H7C9 122 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 NECTIN3Q9NQS3 549 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 NFU1Q9UMS0 254 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 ICKQ9UPZ9 632 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 KIF13AQ9H1H9 1805 aa4.83□□□□□ -1.64
CHD9-212ENST00000564641 PLB1Q6P1J6 1458 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 TEX14Q8IWB6 1497 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 PTPRGP23470 1445 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 PNMA6EA0A0J9YXQ4 647 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 FOXO6A8MYZ6 492 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 M0QZQ0 153 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 HNRNPDLO14979 420 aaKnown RBP4.82□□□□□ -1.64
CHD9-212ENST00000564641 KRT86O43790 486 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 NFATC1O95644 943 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 NDST3O95803 873 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 RASSF2P50749 326 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 SLC37A1P57057 533 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 ROR2Q01974 943 aaKnown RBP4.82□□□□□ -1.64
CHD9-212ENST00000564641 KRT81Q14533 505 aa4.82□□□□□ -1.64
CHD9-212ENST00000564641 CAPRIN2Q6IMN6 1127 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms