RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SLC14A1Q13336 389 aa5.21□□□□□ -1.58
LINC00560-201ENST00000564593 GPR162Q16538 588 aa5.21□□□□□ -1.58
LINC00560-201ENST00000564593 CC2D1BQ5T0F9 858 aaKnown RBP5.21□□□□□ -1.58
LINC00560-201ENST00000564593 RETSATQ6NUM9 610 aa5.21□□□□□ -1.58
LINC00560-201ENST00000564593 GPR150Q8NGU9 434 aa5.21□□□□□ -1.58
LINC00560-201ENST00000564593 ZNF845Q96IR2 970 aaPredicted RBP5.21□□□□□ -1.58
LINC00560-201ENST00000564593 PPP1R10Q96QC0 940 aaKnown RBP5.21□□□□□ -1.58
LINC00560-201ENST00000564593 TRIM2Q9C040 744 aa5.21□□□□□ -1.58
LINC00560-201ENST00000564593 AFG3L2Q9Y4W6 797 aa5.21□□□□□ -1.58
LINC00560-201ENST00000564593 SIRT4Q9Y6E7 314 aaPredicted RBP5.21□□□□□ -1.58
LINC00560-201ENST00000564593 WNT6Q9Y6F9 365 aa5.21□□□□□ -1.58
LINC00560-201ENST00000564593 CCDC196A0A1B0GTZ2 297 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 POC1B-GALNT4F8VUJ3 575 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 SMIM22K7EJ46 135 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 TNNT1P13805 278 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 LIFRP42702 1097 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 SHC2P98077 582 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 FHL2Q14192 279 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 GLE1Q53GS7 698 aaKnown RBP5.2□□□□□ -1.58
LINC00560-201ENST00000564593 AWAT1Q58HT5 328 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 WDR45BQ5MNZ6 344 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 ANO7Q6IWH7 933 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 RANBP10Q6VN20 620 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 C16orf71Q8IYS4 520 aaPredicted RBP5.2□□□□□ -1.58
LINC00560-201ENST00000564593 GALNT4Q8N4A0 578 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 KCNJ9Q92806 393 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 SENP7Q9BQF6 1050 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 NUAK2Q9H093 628 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 SFXN1Q9H9B4 322 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 ARL8BQ9NVJ2 186 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 MTMR4Q9NYA4 1195 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 TMEM98Q9Y2Y6 226 aa5.2□□□□□ -1.58
LINC00560-201ENST00000564593 C16orf96A6NNT2 1141 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 PEX12O00623 359 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 IFIT1P09914 478 aaKnown RBP5.19□□□□□ -1.58
LINC00560-201ENST00000564593 ALDOCP09972 364 aaKnown RBP5.19□□□□□ -1.58
LINC00560-201ENST00000564593 ELF1P32519 619 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 ZNF84P51523 738 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 THOC5Q13769 683 aaKnown RBP5.19□□□□□ -1.58
LINC00560-201ENST00000564593 KPNB1Q14974 876 aaKnown RBP5.19□□□□□ -1.58
LINC00560-201ENST00000564593 PFKFB3Q16875 520 aaPredicted RBP5.19□□□□□ -1.58
LINC00560-201ENST00000564593 RUNDC3AQ59EK9 446 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 ZNF362Q5T0B9 420 aaPredicted RBP5.19□□□□□ -1.58
LINC00560-201ENST00000564593 DENND1BQ6P3S1 775 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 MAATS1Q7Z4T9 603 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 ARHGEF25Q86VW2 580 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 ADGRF3Q8IZF5 1079 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 ENDOVQ8N8Q3 282 aaKnown RBP5.19□□□□□ -1.58
LINC00560-201ENST00000564593 CELF1Q92879 486 aaKnown RBP5.19□□□□□ -1.58
LINC00560-201ENST00000564593 SARAFQ96BY9 339 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 OSBPL5Q9H0X9 879 aaPredicted RBP5.19□□□□□ -1.58
LINC00560-201ENST00000564593 UNC45AQ9H3U1 944 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 ZHX3Q9H4I2 956 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 GDAQ9Y2T3 454 aa5.19□□□□□ -1.58
LINC00560-201ENST00000564593 ENO1P06733 434 aaKnown RBP5.18□□□□□ -1.58
LINC00560-201ENST00000564593 HNRNPA1P09651 372 aaKnown RBP eCLIP5.18□□□□□ -1.58
LINC00560-201ENST00000564593 LYL1P12980 280 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 TNFAIP3P21580 790 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 KRT9P35527 623 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 PGM1P36871 562 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 INHBCP55103 352 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 DMWDQ09019 674 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 KLF10Q13118 480 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 ALKBH1Q13686 389 aaKnown RBP5.18□□□□□ -1.58
LINC00560-201ENST00000564593 LIPMQ5VYY2 423 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 PPHLN1Q8NEY8 458 aaKnown RBP5.18□□□□□ -1.58
LINC00560-201ENST00000564593 ABHD14AQ9BUJ0 271 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 HDHD5Q9BXW7 423 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 THAP1Q9NVV9 213 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 SERGEFQ9UGK8 458 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 MAFFQ9ULX9 164 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 SUFUQ9UMX1 484 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 INSL6Q9Y581 213 aa5.18□□□□□ -1.58
LINC00560-201ENST00000564593 DHX16O60231 1041 aaKnown RBP5.17□□□□□ -1.58
LINC00560-201ENST00000564593 CNTN5O94779 1100 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 MBD4O95243 580 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 CHRM5P08912 532 aaPredicted RBP5.17□□□□□ -1.58
LINC00560-201ENST00000564593 WEE2P0C1S8 567 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 RFPL3SP0C7P2 107 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 PRPH2P23942 346 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 NR1H2P55055 460 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 MPP1Q00013 466 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 B4GALNT1Q00973 533 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 DPTQ07507 201 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 ANXA2RQ3ZCQ2 193 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 CERKLQ49MI3 558 aaPredicted RBP5.17□□□□□ -1.58
LINC00560-201ENST00000564593 SUMO4Q6EEV6 95 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 DHRS13Q6UX07 377 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 CHSY1Q86X52 802 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 TCP11L2Q8N4U5 519 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 PNLDC1Q8NA58 520 aaKnown RBP5.17□□□□□ -1.58
LINC00560-201ENST00000564593 SKA1Q96BD8 255 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 RRP36Q96EU6 259 aaKnown RBP5.17□□□□□ -1.58
LINC00560-201ENST00000564593 MASTLQ96GX5 879 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 ZNF764Q96H86 408 aaPredicted RBP5.17□□□□□ -1.58
LINC00560-201ENST00000564593 RITA1Q96K30 269 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 TRIM31Q9BZY9 425 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 STN1Q9H668 368 aaKnown RBP5.17□□□□□ -1.58
LINC00560-201ENST00000564593 SYNPO2LQ9H987 977 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 JMJD4Q9H9V9 463 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms