RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CACNA1HO95180 2353 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 KANSL1LA0AUZ9 987 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 DAPK3O43293 454 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 NHLH1Q02575 133 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 CA9Q16790 459 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 SPOCD1Q6ZMY3 1216 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 HTR3DQ70Z44 454 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 CCDC105Q8IYK2 499 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 PJA1Q8NG27 643 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 USP13Q92995 863 aaPredicted RBP17.5■□□□□ 0.39
CMTM3-208ENST00000564247 KCTD15Q96SI1 283 aaPredicted RBP17.5■□□□□ 0.39
CMTM3-208ENST00000564247 SMG9Q9H0W8 520 aaKnown RBP17.5■□□□□ 0.39
CMTM3-208ENST00000564247 IRF2BPLQ9H1B7 796 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 PCDH18Q9HCL0 1135 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 RCOR3Q9P2K3 495 aaPredicted RBP17.5■□□□□ 0.39
CMTM3-208ENST00000564247 RNF14Q9UBS8 474 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 SIT1Q9Y3P8 196 aa17.5■□□□□ 0.39
CMTM3-208ENST00000564247 COL4A3Q01955 1670 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 E2F8A0AVK6 867 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 ARNTLO00327 626 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 EEF2KO00418 725 aaKnown RBP17.49■□□□□ 0.39
CMTM3-208ENST00000564247 CHADO15335 359 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 CREB3O43889 395 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 SRGAP2O75044 1071 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 PRAMEF12O95522 483 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 HTR7P34969 479 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 PAFAH1B1P43034 410 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 ARSEP51690 589 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 ZNF211Q13398 564 aaPredicted RBP17.49■□□□□ 0.39
CMTM3-208ENST00000564247 TFDP3Q5H9I0 405 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 ADGRF1Q5T601 910 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 CCDC181Q5TID7 509 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 MFSD7Q6UXD7 560 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 VSIG1Q86XK7 387 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 YAF2Q8IY57 180 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 PYROXD2Q8N2H3 581 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 FAM71BQ8TC56 605 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 LRRC3BQ96PB8 259 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 NAP1L3Q99457 506 aaPredicted RBP17.49■□□□□ 0.39
CMTM3-208ENST00000564247 OSBPL6Q9BZF3 934 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 FOXQ1Q9C009 403 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 PRDM16Q9HAZ2 1276 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 ANLNQ9NQW6 1124 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 HEBP1Q9NRV9 189 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 AGO1Q9UL18 857 aaKnown RBP17.49■□□□□ 0.39
CMTM3-208ENST00000564247 HS3ST4Q9Y661 456 aa17.49■□□□□ 0.39
CMTM3-208ENST00000564247 KIF26AQ9ULI4 1882 aaPredicted RBP17.49■□□□□ 0.39
CMTM3-208ENST00000564247 ZNF487B1APH4 448 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 F5H5T6 163 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 FANCGO15287 622 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 KLKB1P03952 638 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 TCF3P15923 654 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 HCAR3P49019 387 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 TPI1P60174 286 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 AMPD2Q01433 879 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 NRG1Q02297 640 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-208ENST00000564247 DPYSL3Q14195 570 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 PPP2R5EQ16537 467 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 MS4A13Q5J8X5 152 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 TPRG1Q6ZUI0 275 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 CHSY1Q86X52 802 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 DTWD2Q8NBA8 298 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.48■□□□□ 0.39
CMTM3-208ENST00000564247 MAIP1Q8WWC4 291 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 NELL2Q99435 816 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 ZNF670Q9BS34 389 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 MAGEB5Q9BZ81 275 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 OSBPL8Q9BZF1 889 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 DLGAP2Q9P1A6 1054 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 TBC1D14Q9P2M4 693 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 CDC23Q9UJX2 597 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 CCL26Q9Y258 94 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 EFR3BQ9Y2G0 817 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 F5P12259 2224 aa17.48■□□□□ 0.39
CMTM3-208ENST00000564247 I6L893 689 aaPredicted RBP17.47■□□□□ 0.39
CMTM3-208ENST00000564247 SLC9A3R1O14745 358 aaPredicted RBP17.47■□□□□ 0.39
CMTM3-208ENST00000564247 TJP3O95049 919 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 CD48P09326 243 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 GLULP15104 373 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 TACR2P21452 398 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 PTPN7P35236 360 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 CHKAP35790 457 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 CDKN2BP42772 138 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 ZXDBP98169 803 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 AUHQ13825 339 aaKnown RBP17.47■□□□□ 0.39
CMTM3-208ENST00000564247 TFDP2Q14188 446 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 ANKRD20A8PQ5CZ79 823 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 PIK3R6Q5UE93 754 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 DCAF12L1Q5VU92 463 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 KAZNQ674X7 775 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 RAP1GAP2Q684P5 730 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 RWDD4Q6NW29 188 aaKnown RBP17.47■□□□□ 0.39
CMTM3-208ENST00000564247 ZNF852Q6ZMS4 543 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 RFX6Q8HWS3 928 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 KIAA1958Q8N8K9 716 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 BPIFB1Q8TDL5 484 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 COG1Q8WTW3 980 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 WBP2Q969T9 261 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 TBC1D31Q96DN5 1066 aa17.47■□□□□ 0.39
CMTM3-208ENST00000564247 CAPZA3Q96KX2 299 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms