RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 PCDHGB2Q9Y5G2 931 aa17.34■□□□□ 0.37
CCNF-203ENST00000564236 SH3BP5O60239 455 aa17.33■□□□□ 0.36
CCNF-203ENST00000564236 LETM1O95202 739 aaPredicted RBP17.33■□□□□ 0.36
CCNF-203ENST00000564236 LUC7L3O95232 432 aaKnown RBP17.33■□□□□ 0.36
CCNF-203ENST00000564236 SPINK2P20155 84 aa17.33■□□□□ 0.36
CCNF-203ENST00000564236 CSKP41240 450 aa17.33■□□□□ 0.36
CCNF-203ENST00000564236 UBE2HP62256 183 aa17.33■□□□□ 0.36
CCNF-203ENST00000564236 PDCLQ13371 301 aa17.33■□□□□ 0.36
CCNF-203ENST00000564236 DCAF6Q58WW2 860 aa17.33■□□□□ 0.36
CCNF-203ENST00000564236 ZNF776Q68DI1 518 aaPredicted RBP17.33■□□□□ 0.36
CCNF-203ENST00000564236 RAB44Q7Z6P3 723 aaPredicted RBP17.33■□□□□ 0.36
CCNF-203ENST00000564236 NAXDQ8IW45 347 aa17.33■□□□□ 0.36
CCNF-203ENST00000564236 ZNF366Q8N895 744 aa17.33■□□□□ 0.36
CCNF-203ENST00000564236 SLC2A13Q96QE2 648 aa17.33■□□□□ 0.36
CCNF-203ENST00000564236 ORAI3Q9BRQ5 295 aa17.33■□□□□ 0.36
CCNF-203ENST00000564236 C6orf106Q9H6K1 298 aaPredicted RBP17.33■□□□□ 0.36
CCNF-203ENST00000564236 PCNX2A6NKB5 2137 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 HYAL3O43820 417 aaPredicted RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 SEMA4FO95754 770 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 CER1O95813 267 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 TRUB2O95900 331 aaKnown RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 APOEP02649 317 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 DNTTP04053 509 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 SRPRAP08240 638 aaKnown RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 RDXP35241 583 aaKnown RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 GRIA4P48058 902 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 VASPP50552 380 aaPredicted RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 AFF3P51826 1226 aaKnown RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 MTA1Q13330 715 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 CDH18Q13634 790 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 TRIP6Q15654 476 aaKnown RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 TTC31Q49AM3 519 aaPredicted RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 FSCBQ5H9T9 825 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 CACUL1Q86Y37 369 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 WDTC1Q8N5D0 677 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 BAHD1Q8TBE0 780 aaPredicted RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 PRMT1Q99873 361 aaKnown RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 ACP6Q9NPH0 428 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCNF-203ENST00000564236 XPO7Q9UIA9 1087 aaKnown RBP17.32■□□□□ 0.36
CCNF-203ENST00000564236 PCOLCE2Q9UKZ9 415 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 SPEGQ15772 3267 aa17.32■□□□□ 0.36
CCNF-203ENST00000564236 TARSL2A2RTX5 802 aaKnown RBP17.31■□□□□ 0.36
CCNF-203ENST00000564236 KCNU1A8MYU2 1149 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 CAPN9O14815 690 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 THAP12O43422 761 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 SLC9A1P19634 815 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 MATKP42679 507 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 ST8SIA6P61647 398 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 SLC12A1Q13621 1099 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 EXOC3L4Q17RC7 722 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 PITRM1Q5JRX3 1037 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 C9orf64Q5T6V5 341 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 TTC39BQ5VTQ0 682 aaPredicted RBP17.31■□□□□ 0.36
CCNF-203ENST00000564236 GBP6Q6ZN66 633 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 FAM124AQ86V42 546 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 MLKLQ8NB16 471 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 ADAM32Q8TC27 787 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 ADAMTS14Q8WXS8 1223 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 BIRC7Q96CA5 298 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 CAMK1GQ96NX5 476 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 MIR1-1HGQ9H1L0 117 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 PABPC3Q9H361 631 aaKnown RBP17.31■□□□□ 0.36
CCNF-203ENST00000564236 GAREM1Q9H706 876 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 KIAA1522Q9P206 1035 aaPredicted RBP17.31■□□□□ 0.36
CCNF-203ENST00000564236 STIM2Q9P246 746 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 ADAMTS1Q9UHI8 967 aa17.31■□□□□ 0.36
CCNF-203ENST00000564236 SIN3BO75182 1162 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 DKK1O94907 266 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 SLC2A3P11169 496 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
CCNF-203ENST00000564236 TACR2P21452 398 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 CD27P26842 260 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 PON1P27169 355 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 PLK1P53350 603 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 SFSWAPQ12872 951 aaKnown RBP17.3■□□□□ 0.36
CCNF-203ENST00000564236 HLA-BQ31612 363 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 ZC3H12AQ5D1E8 599 aaKnown RBP17.3■□□□□ 0.36
CCNF-203ENST00000564236 GJB7Q6PEY0 223 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 CCDC117Q8IWD4 279 aaPredicted RBP17.3■□□□□ 0.36
CCNF-203ENST00000564236 CARNMT1Q8N4J0 409 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 CPXM1Q96SM3 734 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 CRACR2AQ9BSW2 395 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 IL21RQ9HBE5 538 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 TM9SF3Q9HD45 589 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 SIX2Q9NPC8 291 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 TM7SF3Q9NS93 570 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 TJP2Q9UDY2 1190 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 KLK13Q9UKR3 277 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 ZMIZ1Q9ULJ6 1067 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 FZD4Q9ULV1 537 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 ERVW-1Q9UQF0 538 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 SLCO1B1Q9Y6L6 691 aa17.3■□□□□ 0.36
CCNF-203ENST00000564236 ADAMTS9Q9P2N4 1935 aa17.29■□□□□ 0.36
CCNF-203ENST00000564236 HSF2BPO75031 334 aa17.29■□□□□ 0.36
CCNF-203ENST00000564236 MOCS3O95396 460 aa17.29■□□□□ 0.36
CCNF-203ENST00000564236 MOCS2O96007 188 aaPredicted RBP17.29■□□□□ 0.36
CCNF-203ENST00000564236 IGHV4-34P06331 123 aa17.29■□□□□ 0.36
CCNF-203ENST00000564236 PITX1P78337 314 aaPredicted RBP17.29■□□□□ 0.36
CCNF-203ENST00000564236 ECT2LQ008S8 904 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms