RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 LYL1P12980 280 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 PCP4P48539 62 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 ELLP55199 621 aaPredicted RBP6.25□□□□□ -1.41
LINC00557-201ENST00000563184 B4GALNT1Q00973 533 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 SLC12A1Q13621 1099 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 CERKLQ49MI3 558 aaPredicted RBP6.25□□□□□ -1.41
LINC00557-201ENST00000563184 CC2D1BQ5T0F9 858 aaKnown RBP6.25□□□□□ -1.41
LINC00557-201ENST00000563184 TMEM88Q6PEY1 159 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 ZNF782Q6ZMW2 699 aaPredicted RBP6.25□□□□□ -1.41
LINC00557-201ENST00000563184 BBS12Q6ZW61 710 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 TMTC1Q8IUR5 882 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 IL17REQ8NFR9 667 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 ATP2A3Q93084 1043 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 TBATAQ96M53 351 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 TMEM160Q9NX00 188 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 SPATA31A5Q5VU36 1347 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 SPATA31A6Q5VVP1 1343 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 SPATA31A7Q8IWB4 1347 aa6.25□□□□□ -1.41
LINC00557-201ENST00000563184 WIPF3A6NGB9 483 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 NPIPB13A6NJU9 1138 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 LINC01548A6NM66 108 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 NPIPB5A8MRT5 1133 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 NPIPB4C9JG80 1138 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 ALDOCP09972 364 aaKnown RBP6.24□□□□□ -1.41
LINC00557-201ENST00000563184 SOX2P48431 317 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 CDK18Q07002 472 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 PFKFB3Q16875 520 aaPredicted RBP6.24□□□□□ -1.41
LINC00557-201ENST00000563184 CTXN3Q4LDR2 81 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 MAP3K21Q5TCX8 1036 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 RTL10Q7L3V2 364 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 RD3Q7Z3Z2 195 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 PRIMA1Q86XR5 153 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 C8orf58Q8NAV2 365 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 SEMA6DQ8NFY4 1073 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 DPF1Q92782 380 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 MAELQ96JY0 434 aaKnown RBP6.24□□□□□ -1.41
LINC00557-201ENST00000563184 EIF2AK1Q9BQI3 630 aaKnown RBP6.24□□□□□ -1.41
LINC00557-201ENST00000563184 EFHD1Q9BUP0 239 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 TM2D2Q9BX73 214 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 CLPBQ9H078 707 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 OSBPL5Q9H0X9 879 aaPredicted RBP6.24□□□□□ -1.41
LINC00557-201ENST00000563184 SFXN1Q9H9B4 322 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 NOD2Q9HC29 1040 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 ARL8BQ9NVJ2 186 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 PI4KBQ9UBF8 816 aa6.24□□□□□ -1.41
LINC00557-201ENST00000563184 A0A1B0GVC2 190 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 MANSC4A6NHS7 340 aaPredicted RBP6.23□□□□□ -1.41
LINC00557-201ENST00000563184 SEPT4O43236 478 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 LATS1O95835 1130 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 ENO1P06733 434 aaKnown RBP6.23□□□□□ -1.41
LINC00557-201ENST00000563184 PRPH2P23942 346 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 AVPR2P30518 371 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 PNPLA4P41247 253 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 YPEL5P62699 121 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 NHLH1Q02575 133 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 UBE3AQ05086 875 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 CHRNDQ07001 517 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 ZNF474Q6S9Z5 364 aaPredicted RBP6.23□□□□□ -1.41
LINC00557-201ENST00000563184 ZNF66Q6ZN08 573 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 MMS22LQ6ZRQ5 1243 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 ADGRG3Q86Y34 549 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 RHPN2Q8IUC4 686 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 ADPRHL1Q8NDY3 354 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 HASPINQ8TF76 798 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 ZNF764Q96H86 408 aaPredicted RBP6.23□□□□□ -1.41
LINC00557-201ENST00000563184 REEP2Q9BRK0 252 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 ABHD14AQ9BUJ0 271 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 HDHD5Q9BXW7 423 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 TLR8Q9NR97 1041 aaKnown RBP6.23□□□□□ -1.41
LINC00557-201ENST00000563184 COX11Q9Y6N1 276 aa6.23□□□□□ -1.41
LINC00557-201ENST00000563184 VWA3AA6NCI4 1184 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 SAC3D1A6NKF1 404 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 TLE2Q04725 743 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 POU5F1BQ06416 359 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 THOC5Q13769 683 aaKnown RBP6.22□□□□□ -1.41
LINC00557-201ENST00000563184 ZNF813Q6ZN06 617 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 MDGA2Q7Z553 956 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 RBM17Q96I25 401 aaKnown RBP6.22□□□□□ -1.41
LINC00557-201ENST00000563184 C5orf34Q96MH7 638 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 FCRL5Q96RD9 977 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 ZNF347Q96SE7 839 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 TRIM2Q9C040 744 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 CRYL1Q9Y2S2 319 aa6.22□□□□□ -1.41
LINC00557-201ENST00000563184 HOXC11O43248 304 aaPredicted RBP6.21□□□□□ -1.42
LINC00557-201ENST00000563184 TGM2P21980 687 aa6.21□□□□□ -1.42
LINC00557-201ENST00000563184 HOXA7P31268 230 aaPredicted RBP6.21□□□□□ -1.42
LINC00557-201ENST00000563184 ANKRD1Q15327 319 aa6.21□□□□□ -1.42
LINC00557-201ENST00000563184 DLGAP5Q15398 846 aa6.21□□□□□ -1.42
LINC00557-201ENST00000563184 GLE1Q53GS7 698 aaKnown RBP6.21□□□□□ -1.42
LINC00557-201ENST00000563184 CBWD5Q5RIA9 395 aa6.21□□□□□ -1.42
LINC00557-201ENST00000563184 RBM44Q6ZP01 1051 aaKnown RBP6.21□□□□□ -1.42
LINC00557-201ENST00000563184 ENDOVQ8N8Q3 282 aaKnown RBP6.21□□□□□ -1.42
LINC00557-201ENST00000563184 USP38Q8NB14 1042 aa6.21□□□□□ -1.42
LINC00557-201ENST00000563184 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.21□□□□□ -1.42
LINC00557-201ENST00000563184 IGFBPL1Q8WX77 278 aa6.21□□□□□ -1.42
LINC00557-201ENST00000563184 MAP4K1Q92918 833 aa6.21□□□□□ -1.42
LINC00557-201ENST00000563184 TXNRD2Q9NNW7 524 aa6.21□□□□□ -1.42
LINC00557-201ENST00000563184 IFT80Q9P2H3 777 aaPredicted RBP6.21□□□□□ -1.42
LINC00557-201ENST00000563184 EMSYQ7Z589 1322 aa6.21□□□□□ -1.42
LINC00557-201ENST00000563184 LMTK3Q96Q04 1460 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms