RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 RBSNQ9H1K0 784 aa16.96■□□□□ 0.31
PKD1-226ENST00000562425 POLMQ9NP87 494 aaPredicted RBP16.96■□□□□ 0.31
PKD1-226ENST00000562425 ABCB8Q9NUT2 735 aa16.96■□□□□ 0.31
PKD1-226ENST00000562425 ELOVL2Q9NXB9 296 aa16.96■□□□□ 0.31
PKD1-226ENST00000562425 CALCOCO1Q9P1Z2 691 aa16.96■□□□□ 0.31
PKD1-226ENST00000562425 CLEC4EQ9ULY5 219 aa16.96■□□□□ 0.31
PKD1-226ENST00000562425 TCRBV5S1A1TA0A578 114 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 MED19A0JLT2 244 aaPredicted RBP16.95■□□□□ 0.3
PKD1-226ENST00000562425 H0Y626 953 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 ZBTB24O43167 697 aaPredicted RBP16.95■□□□□ 0.3
PKD1-226ENST00000562425 ALDH1A2O94788 518 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 LUC7L3O95232 432 aaKnown RBP16.95■□□□□ 0.3
PKD1-226ENST00000562425 GJB6O95452 261 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 ADCY5O95622 1261 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 PABPC1P11940 636 aaKnown RBP16.95■□□□□ 0.3
PKD1-226ENST00000562425 HNRNPLP14866 589 aaKnown RBP eCLIP16.95■□□□□ 0.3
PKD1-226ENST00000562425 CNR2P34972 360 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 SGSHP51688 502 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 ZNF143P52747 638 aaPredicted RBP16.95■□□□□ 0.3
PKD1-226ENST00000562425 CDO1Q16878 200 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 PLEKHA7Q6IQ23 1121 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 FBXL22Q6P050 247 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 FAM131BQ86XD5 332 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 CFAP52Q8N1V2 620 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.95■□□□□ 0.3
PKD1-226ENST00000562425 RPRD1AQ96P16 312 aaPredicted RBP16.95■□□□□ 0.3
PKD1-226ENST00000562425 MCEEQ96PE7 176 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 PPP1R9BQ96SB3 815 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 DNAJC7Q99615 494 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 CIPCQ9C0C6 399 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 ISCUQ9H1K1 167 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 MRPL47Q9HD33 250 aaKnown RBP16.95■□□□□ 0.3
PKD1-226ENST00000562425 C2orf42Q9NWW7 574 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 NCDNQ9UBB6 729 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 GGA2Q9UJY4 613 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 HS3ST4Q9Y661 456 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 SCINQ9Y6U3 715 aa16.95■□□□□ 0.3
PKD1-226ENST00000562425 ACACBO00763 2458 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 A0A1B0GVM2 712 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 TCAF2A6NFQ2 919 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 SGK1O00141 431 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 MOCS3O95396 460 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 ATP5BP06576 529 aaKnown RBP16.94■□□□□ 0.3
PKD1-226ENST00000562425 POLR2EP19388 210 aaKnown RBP16.94■□□□□ 0.3
PKD1-226ENST00000562425 HLA-FP30511 346 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 FNTBP49356 437 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 MAMLD1Q13495 774 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 C15orf59Q2T9L4 293 aaPredicted RBP16.94■□□□□ 0.3
PKD1-226ENST00000562425 PPP1R15BQ5SWA1 713 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 EGFLAMQ63HQ2 1017 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 HEATR6Q6AI08 1181 aaKnown RBP16.94■□□□□ 0.3
PKD1-226ENST00000562425 CHST9Q7L1S5 443 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 KIAA0907Q7Z7F0 614 aaPredicted RBP16.94■□□□□ 0.3
PKD1-226ENST00000562425 CNGA4Q8IV77 575 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 FAM172AQ8WUF8 416 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 CENPIQ92674 756 aaPredicted RBP16.94■□□□□ 0.3
PKD1-226ENST00000562425 ZNF653Q96CK0 615 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 CNPY3Q9BT09 278 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 ADAM33Q9BZ11 813 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 KIAA1522Q9P206 1035 aaPredicted RBP16.94■□□□□ 0.3
PKD1-226ENST00000562425 CNOT8Q9UFF9 292 aaKnown RBP16.94■□□□□ 0.3
PKD1-226ENST00000562425 VANGL2Q9ULK5 521 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 PLA2G4CQ9UP65 541 aa16.94■□□□□ 0.3
PKD1-226ENST00000562425 KIAA1549LQ6ZVL6 1849 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 CLDN11O75508 207 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 CHRM1P11229 460 aaPredicted RBP16.93■□□□□ 0.3
PKD1-226ENST00000562425 HOXB2P14652 356 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 ADRA1BP35368 520 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 ATXN1P54253 815 aaKnown RBP16.93■□□□□ 0.3
PKD1-226ENST00000562425 RPL7AP62424 266 aaKnown RBP16.93■□□□□ 0.3
PKD1-226ENST00000562425 SLC12A1Q13621 1099 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 ARID5BQ14865 1188 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 C5orf22Q49AR2 442 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 ALKBH5Q6P6C2 394 aaKnown RBP16.93■□□□□ 0.3
PKD1-226ENST00000562425 TMC6Q7Z403 805 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 WDR5BQ86VZ2 330 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 CCAR2Q8N163 923 aaKnown RBP16.93■□□□□ 0.3
PKD1-226ENST00000562425 DCLK2Q8N568 766 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 MYEOVQ96EZ4 313 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 HHIPQ96QV1 700 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 EPC1Q9H2F5 836 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 DEF6Q9H4E7 631 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 ARHGAP20Q9P2F6 1191 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 THAP10Q9P2Z0 257 aaPredicted RBP16.93■□□□□ 0.3
PKD1-226ENST00000562425 EBF1Q9UH73 591 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 ATG2BQ96BY7 2078 aa16.93■□□□□ 0.3
PKD1-226ENST00000562425 A0A087X0T9 212 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.92■□□□□ 0.3
PKD1-226ENST00000562425 ANTXRLA6NF34 631 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 PRR5-ARHGAP8B1AHC4 643 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 AKR1B15C9JRZ8 316 aaPredicted RBP16.92■□□□□ 0.3
PKD1-226ENST00000562425 AXIN1O15169 862 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 LILRB5O75023 590 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 ADAM23O75077 832 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 MFAP3LO75121 409 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 ASLP04424 464 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 PLEKP08567 350 aaPredicted RBP16.92■□□□□ 0.3
PKD1-226ENST00000562425 FAM228BP0C875 321 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 CD70P32970 193 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 EIF4A3P38919 411 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms