RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 FNIP2Q9P278 1114 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 KLHL8Q9P2G9 620 aaPredicted RBP13□□□□□ -0.33
AC055717.2-201ENST00000561864 PCDHA11Q9Y5I1 949 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 SDR42E2A6NKP2 422 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 FAM159BA6NKW6 160 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 H7C4K7 107 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 TM9SF1O15321 606 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 SPAG7O75391 227 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 KRT37O76014 449 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 SUN1O94901 812 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 MT-ND3P03897 115 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 AMHP03971 560 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 OR4Q2P0C623 313 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 SLC2A3P11169 496 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 KRT4P19013 534 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 CA4P22748 312 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 PSMB4P28070 264 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 GARSP41250 739 aaKnown RBP12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 SERPINB9P50453 376 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 MTM1Q13496 603 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 GPNMBQ14956 572 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 MANEALQ5VSG8 457 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 NUGGCQ68CJ6 796 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 ZNF449Q6P9G9 518 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 LRRC6Q86X45 466 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 C4orf33Q8N1A6 199 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 OTUD6BQ8N6M0 293 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 GDAP1Q8TB36 358 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 C2orf15Q8WU43 125 aaKnown RBP12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 TBC1D31Q96DN5 1066 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 MTBPQ96DY7 904 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 MRRFQ96E11 262 aaKnown RBP12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 TSGA13Q96PP4 275 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 TGS1Q96RS0 853 aaKnown RBP12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 PLCD4Q9BRC7 762 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 UNC93B1Q9H1C4 597 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 GBA3Q9H227 469 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 CATSPERBQ9H7T0 1116 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 KIF9Q9HAQ2 790 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 PLAC1Q9HBJ0 212 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 PAK6Q9NQU5 681 aaPredicted RBP12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 MARCH5Q9NX47 278 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 IL37Q9NZH6 218 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 NEU3Q9UQ49 428 aa12.99□□□□□ -0.33
AC055717.2-201ENST00000561864 A0A1W2PPM1 405 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 A0A1W2PQH9 124 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 AP3B1O00203 1094 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 PSMD3O43242 534 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 PAGE1O75459 146 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 RTN3O95197 1032 aaPredicted RBP12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 AP2A1O95782 977 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 OAS1P00973 400 aaKnown RBP12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 ALDH2P05091 517 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 ALADP13716 330 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 PGAM1P18669 254 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 CNTFP26441 200 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 SLC11A1P49279 550 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 PSEN1P49768 467 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 WDR4P57081 412 aaKnown RBP12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 HHATQ5VTY9 493 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 FAM171A1Q5VUB5 890 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 CCDC121Q6ZUS5 278 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 MARK2Q7KZI7 788 aaKnown RBP12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 PPM1NQ8N819 430 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 BANPQ8N9N5 519 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 SPPL2BQ8TCT7 592 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 CASP10Q92851 521 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 APOPT1Q96IL0 206 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 PPP1R2P1Q96PQ5 205 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 MLXIPLQ9NP71 852 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 MKS1Q9NXB0 559 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 TLR6Q9Y2C9 796 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 TRIM17Q9Y577 477 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 SNX10Q9Y5X0 201 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 MAD1L1Q9Y6D9 718 aa12.98□□□□□ -0.33
AC055717.2-201ENST00000561864 FAM92AA1XBS5 289 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 MYO1CO00159 1063 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 KCNK1O00180 336 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 SNX3O60493 162 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 KRT38O76015 456 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 ALDH1A2O94788 518 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 CXCL10P02778 98 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 SNRPAP09012 282 aaKnown RBP12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 TAC1P20366 129 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 RPA3P35244 121 aaPredicted RBP12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 SLC18A2Q05940 514 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 FAAP100Q0VG06 881 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 IFT88Q13099 833 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 FRG1Q14331 258 aaKnown RBP12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 PRPSAP1Q14558 356 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 SEPT7Q16181 437 aaKnown RBP12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 PDK4Q16654 411 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 SPANXN3Q5MJ09 141 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 ACBD5Q5T8D3 534 aaPredicted RBP12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 FUT10Q6P4F1 479 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 PID1Q7Z2X4 250 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 CTAGE3PQ8IX95 158 aa12.97□□□□□ -0.33
AC055717.2-201ENST00000561864 KLHDC8BQ8IXV7 354 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms