RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 C1orf220Q5T0J3 134 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 GPR107Q5VW38 600 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 GALNT18Q6P9A2 607 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 CCDC81Q6ZN84 652 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 C1orf186Q6ZWK4 172 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 PALM2Q8IXS6 379 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 SIX6OS1Q8N1H7 587 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 TFB1MQ8WVM0 346 aaKnown RBP19.08■□□□□ 0.64
RAB40C-206ENST00000561781 EGLN2Q96KS0 407 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 EIF2AK1Q9BQI3 630 aaKnown RBP19.08■□□□□ 0.64
RAB40C-206ENST00000561781 RTKNQ9BST9 563 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 HERC2P3Q9BVR0 1158 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 C20orf27Q9GZN8 174 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 RNF38Q9H0F5 515 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 FAM96AQ9H5X1 160 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 GINM1Q9NU53 330 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 THAP1Q9NVV9 213 aa19.08■□□□□ 0.64
RAB40C-206ENST00000561781 ILVBLA1L0T0 632 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 C7orf72A4D263 438 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 PI4K2BG5E9Z4 385 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 CHRNEQ04844 493 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 ANKRD22Q5VYY1 191 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 FRMD7Q6ZUT3 714 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 PCGF5Q86SE9 256 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 SLC9A9Q8IVB4 645 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 MCOLN2Q8IZK6 566 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 LSMEM2Q8N112 164 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 TMEM102Q8N9M5 508 aaPredicted RBP19.07■□□□□ 0.64
RAB40C-206ENST00000561781 EXD1Q8NHP7 514 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 ACDQ96AP0 544 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 ANKRD60Q9BZ19 345 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 SHCBP1LQ9BZQ2 653 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 XPNPEP1Q9NQW7 623 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 SEL1LQ9UBV2 794 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 UBE4BO95155 1302 aa19.07■□□□□ 0.64
RAB40C-206ENST00000561781 TISP43B9A030 160 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 USP17L10C9JJH3 530 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 M0QX08 132 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 ZBTB39O15060 712 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 SLC22A1O15245 554 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 GH2P01242 217 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 ABCB1P08183 1280 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-206ENST00000561781 NELFEP18615 380 aaKnown RBP19.06■□□□□ 0.64
RAB40C-206ENST00000561781 MFAP3P55082 362 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 NFX1Q12986 1120 aaKnown RBP19.06■□□□□ 0.64
RAB40C-206ENST00000561781 MGAT5BQ3V5L5 792 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 PPM1LQ5SGD2 360 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 DRICH1Q6PGQ1 229 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-206ENST00000561781 TNIP2Q8NFZ5 429 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 ZNF347Q96SE7 839 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 TMEM121Q9BTD3 319 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 SNX25Q9H3E2 840 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 USTQ9Y2C2 406 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 FARP1Q9Y4F1 1045 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-206ENST00000561781 COL2A1P02458 1487 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-206ENST00000561781 GCATO75600 419 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 INHBAP08476 426 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 SNHG28P0DPA3 235 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 ATF7P17544 494 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-206ENST00000561781 TRAF2Q12933 501 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 NFATC3Q12968 1075 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 NRF1Q16656 503 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 ABCB5Q2M3G0 1257 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 ODR4Q5SWX8 454 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 HAUS6Q7Z4H7 955 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 CPA5Q8WXQ8 436 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 ZNF486Q96H40 463 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-206ENST00000561781 NPLQ9BXD5 320 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-206ENST00000561781 RMND5AQ9H871 391 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 ELP3Q9H9T3 547 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 OTOFQ9HC10 1997 aa19.06■□□□□ 0.64
RAB40C-206ENST00000561781 FAM155AB1AL88 458 aaPredicted RBP19.05■□□□□ 0.64
RAB40C-206ENST00000561781 SGK1O00141 431 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 ZBTB5O15062 677 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 CLPXO76031 633 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 ERBB2P04626 1255 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 NAT2P11245 290 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 EPHA3P29320 983 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 OTUD4Q01804 1114 aaKnown RBP19.05■□□□□ 0.64
RAB40C-206ENST00000561781 ZNF846Q147U1 533 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 ATP13A4Q4VNC1 1196 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 TMTC4Q5T4D3 741 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 PPP4R4Q6NUP7 873 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 STXBP4Q6ZWJ1 553 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 ARCQ7LC44 396 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 PIWIL2Q8TC59 973 aaKnown RBP19.05■□□□□ 0.64
RAB40C-206ENST00000561781 LENG9Q96B70 501 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 APOL6Q9BWW8 343 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 HOXD1Q9GZZ0 328 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 AVENQ9NQS1 362 aaPredicted RBP19.05■□□□□ 0.64
RAB40C-206ENST00000561781 TBC1D14Q9P2M4 693 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 ABT1Q9ULW3 272 aaKnown RBP19.05■□□□□ 0.64
RAB40C-206ENST00000561781 FAM155BO75949 473 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 HUNKP57058 714 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 ZNF543Q08ER8 600 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 PPP2R5DQ14738 602 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 FAM47CQ5HY64 1035 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 RAVER1Q8IY67 606 aaKnown RBP19.05■□□□□ 0.64
RAB40C-206ENST00000561781 KIAA2013Q8IYS2 634 aa19.05■□□□□ 0.64
RAB40C-206ENST00000561781 HCAR2Q8TDS4 363 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms