RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 PPM1EQ8WY54 764 aa13.23□□□□□ -0.29
COTL1-202ENST00000561707 FGF13Q92913 245 aa13.23□□□□□ -0.29
COTL1-202ENST00000561707 PABPC5Q96DU9 382 aaKnown RBP13.23□□□□□ -0.29
COTL1-202ENST00000561707 MYADMQ96S97 322 aa13.23□□□□□ -0.29
COTL1-202ENST00000561707 LINC00597Q9H2U6 94 aa13.23□□□□□ -0.29
COTL1-202ENST00000561707 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.23□□□□□ -0.29
COTL1-202ENST00000561707 HEY1Q9Y5J3 304 aa13.23□□□□□ -0.29
COTL1-202ENST00000561707 V9GYY5 206 aaPredicted RBP13.23□□□□□ -0.29
COTL1-202ENST00000561707 DOCK8Q8NF50 2099 aa13.23□□□□□ -0.29
COTL1-202ENST00000561707 SHROOM3Q8TF72 1996 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 IGLV3-10A0A075B6K4 115 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.22□□□□□ -0.29
COTL1-202ENST00000561707 CCDC188H7C350 402 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 PHF2O75151 1096 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 HOXC13P31276 330 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 COILP38432 576 aaPredicted RBP13.22□□□□□ -0.29
COTL1-202ENST00000561707 ZNF135P52742 658 aaPredicted RBP13.22□□□□□ -0.29
COTL1-202ENST00000561707 RPS24P62847 133 aaKnown RBP13.22□□□□□ -0.29
COTL1-202ENST00000561707 ITIH3Q06033 890 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 PAFAH1B3Q15102 231 aaKnown RBP13.22□□□□□ -0.29
COTL1-202ENST00000561707 CYP1B1Q16678 543 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 P2RY11Q96G91 374 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 HINFPQ9BQA5 517 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 LRRC1Q9BTT6 524 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 KLC2Q9H0B6 622 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 EPC1Q9H2F5 836 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 LRRC19Q9H756 370 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 NDFIP2Q9NV92 336 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 PPARGC1AQ9UBK2 798 aaKnown RBP13.22□□□□□ -0.29
COTL1-202ENST00000561707 STOML2Q9UJZ1 356 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 LSM7Q9UK45 103 aaKnown RBP13.22□□□□□ -0.29
COTL1-202ENST00000561707 DNPEPQ9ULA0 475 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 ZFP37Q9Y6Q3 630 aaPredicted RBP13.22□□□□□ -0.29
COTL1-202ENST00000561707 NUP210Q8TEM1 1887 aaPredicted RBP13.22□□□□□ -0.29
COTL1-202ENST00000561707 TRANK1O15050 2925 aa13.22□□□□□ -0.29
COTL1-202ENST00000561707 GOLGA6L10A0A0M3HER8 536 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 E2F8A0AVK6 867 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 F5H5T6 163 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 H3BQ06 376 aaPredicted RBP13.21□□□□□ -0.29
COTL1-202ENST00000561707 LIASO43766 372 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 MFSD11O43934 449 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 ZFXP17010 805 aaPredicted RBP13.21□□□□□ -0.29
COTL1-202ENST00000561707 RHOQP17081 205 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 TGM2P21980 687 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 PTGIRP43119 386 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 EIF3EP60228 445 aaKnown RBP13.21□□□□□ -0.29
COTL1-202ENST00000561707 ZNF77Q15935 545 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 C5orf22Q49AR2 442 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 HABP4Q5JVS0 413 aaKnown RBP13.21□□□□□ -0.29
COTL1-202ENST00000561707 TEX35Q5T0J7 233 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 TMCO3Q6UWJ1 677 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 TFAP2DQ7Z6R9 452 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 ZC3H18Q86VM9 953 aaKnown RBP13.21□□□□□ -0.29
COTL1-202ENST00000561707 NLRP14Q86W24 1093 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 NPWQ8N729 165 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 TTC13Q8NBP0 860 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 SLC35B2Q8TB61 432 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 P3H4Q92791 437 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 CELF6Q96J87 481 aaKnown RBP13.21□□□□□ -0.29
COTL1-202ENST00000561707 PRICKLE1Q96MT3 831 aaPredicted RBP13.21□□□□□ -0.29
COTL1-202ENST00000561707 GUCD1Q96NT3 240 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 RPRD1AQ96P16 312 aaPredicted RBP13.21□□□□□ -0.29
COTL1-202ENST00000561707 DDX50Q9BQ39 737 aaKnown RBP13.21□□□□□ -0.29
COTL1-202ENST00000561707 ZYG11BQ9C0D3 744 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 POMKQ9H5K3 350 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 CATSPERBQ9H7T0 1116 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 DTLQ9NZJ0 730 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 CD207Q9UJ71 328 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 CDH7Q9ULB5 785 aa13.21□□□□□ -0.29
COTL1-202ENST00000561707 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
COTL1-202ENST00000561707 GRXCR2A6NFK2 248 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 WASH4PA8MWX3 477 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 H7C0C1 242 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 APOC4-APOC2K7ER74 178 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 GFRA2O00451 464 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 RAD51CO43502 376 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 TBL1XO60907 577 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 LATS1O95835 1130 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 APOC2P02655 101 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 WEE1P30291 646 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 HTR7P34969 479 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 MTHFRP42898 656 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 ATP5OP48047 213 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 SLC7A5Q01650 507 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 USP4Q13107 963 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 MTA1Q13330 715 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 NOMO1Q15155 1222 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 TANGO2Q6ICL3 276 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 DARS2Q6PI48 645 aaKnown RBP13.2□□□□□ -0.3
COTL1-202ENST00000561707 CCDC137Q6PK04 289 aaKnown RBP13.2□□□□□ -0.3
COTL1-202ENST00000561707 TPGS1Q6ZTW0 290 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 PRUNE1Q86TP1 453 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 DDX42Q86XP3 938 aaKnown RBP eCLIP13.2□□□□□ -0.3
COTL1-202ENST00000561707 FAM217AQ8IXS0 508 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 CELF5Q8N6W0 485 aaKnown RBP13.2□□□□□ -0.3
COTL1-202ENST00000561707 RTL3Q8N8U3 475 aaKnown RBP13.2□□□□□ -0.3
COTL1-202ENST00000561707 C12orf50Q8NA57 414 aaPredicted RBP13.2□□□□□ -0.3
COTL1-202ENST00000561707 DEPDC1BQ8WUY9 529 aa13.2□□□□□ -0.3
COTL1-202ENST00000561707 TMA16Q96EY4 203 aaKnown RBP13.2□□□□□ -0.3
COTL1-202ENST00000561707 RPGRIP1Q96KN7 1286 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms