RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 RAP1GAP2Q684P5 730 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 OR6B2Q6IFH4 312 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 C11orf57Q6ZUT1 292 aaPredicted RBP10.65□□□□□ -0.7
CLK3-205ENST00000561673 FAM183BPQ6ZVS7 135 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 FAM124AQ86V42 546 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 LGI2Q8N0V4 545 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 C1orf131Q8NDD1 294 aaKnown RBP10.65□□□□□ -0.7
CLK3-205ENST00000561673 DNASE2BQ8WZ79 361 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 MYO19Q96H55 970 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 NOX5Q96PH1 765 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 MTG2Q9H4K7 406 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 PLCB1Q9NQ66 1216 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLK3-205ENST00000561673 ASNSD1Q9NWL6 643 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 COX16Q9P0S2 106 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 SUN2Q9UH99 717 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 SLC12A6Q9UHW9 1150 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 ZFHX4Q86UP3 3567 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 GON4LQ3T8J9 2241 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 TNRC6BQ9UPQ9 1833 aaKnown RBP10.64□□□□□ -0.71
CLK3-205ENST00000561673 METTL12A8MUP2 240 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 H0Y626 953 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 HSF2BPO75031 334 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 LUC7L3O95232 432 aaKnown RBP10.64□□□□□ -0.71
CLK3-205ENST00000561673 SYPP08247 313 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 SLC2A3P11169 496 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 GNSP15586 552 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 CSRP1P21291 193 aaKnown RBP10.64□□□□□ -0.71
CLK3-205ENST00000561673 ABCB4P21439 1286 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 CCR1P32246 355 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 CTSOP43234 321 aaPredicted RBP10.64□□□□□ -0.71
CLK3-205ENST00000561673 BPIFB4P59827 614 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 RPS14P62263 151 aaKnown RBP10.64□□□□□ -0.71
CLK3-205ENST00000561673 SLC6A3Q01959 620 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 RAPGEF1Q13905 1077 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 DRAP1Q14919 205 aaPredicted RBP10.64□□□□□ -0.71
CLK3-205ENST00000561673 PLEKHG6Q3KR16 790 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 PTPN20Q4JDL3 420 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 PITRM1Q5JRX3 1037 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 DCAF12L1Q5VU92 463 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 OLFML1Q6UWY5 402 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 CHSY1Q86X52 802 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 CCDC117Q8IWD4 279 aaPredicted RBP10.64□□□□□ -0.71
CLK3-205ENST00000561673 MINDY1Q8N5J2 469 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 ATP6V0D2Q8N8Y2 350 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 OR2I1PQ8NGU4 316 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 GPT2Q8TD30 523 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 RNF34Q969K3 372 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 MRGPRX3Q96LB0 322 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 PRMT1Q99873 361 aaKnown RBP10.64□□□□□ -0.71
CLK3-205ENST00000561673 NAA15Q9BXJ9 866 aaKnown RBP10.64□□□□□ -0.71
CLK3-205ENST00000561673 FAM204AQ9H8W3 233 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 DDIT4Q9NX09 232 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 KIAA1522Q9P206 1035 aaPredicted RBP10.64□□□□□ -0.71
CLK3-205ENST00000561673 ANGPTL2Q9UKU9 493 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 NFE2L3Q9Y4A8 694 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 FHOD1Q9Y613 1164 aa10.64□□□□□ -0.71
CLK3-205ENST00000561673 CNOT1A5YKK6 2376 aaKnown RBP10.63□□□□□ -0.71
CLK3-205ENST00000561673 MEI4A8MW99 385 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 UPK3BL1B0FP48 263 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 UPK3BL2E5RIL1 263 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 F5H5T6 163 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 OPHN1O60890 802 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 ASLP04424 464 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 UCHL3P15374 230 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 CYP11B1P15538 503 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 ACSL1P33121 698 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 SNX16P57768 344 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 ST8SIA6P61647 398 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 SHC2P98077 582 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 ECT2LQ008S8 904 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 ZBTB16Q05516 673 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 SEMA3BQ13214 749 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 NME3Q13232 169 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 C9orf64Q5T6V5 341 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 SLC26A9Q7LBE3 791 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 PIP4P1Q86T03 277 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 CIR1Q86X95 450 aaPredicted RBP10.63□□□□□ -0.71
CLK3-205ENST00000561673 APCDD1Q8J025 514 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 PIP4P2Q8N4L2 257 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 HDDC3Q8N4P3 179 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 DEFB124Q8NES8 71 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 ZNF397Q8NF99 534 aaPredicted RBP10.63□□□□□ -0.71
CLK3-205ENST00000561673 ENOX1Q8TC92 643 aaKnown RBP10.63□□□□□ -0.71
CLK3-205ENST00000561673 ADAM33Q9BZ11 813 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 MIR1-1HGQ9H1L0 117 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 C6orf106Q9H6K1 298 aaPredicted RBP10.63□□□□□ -0.71
CLK3-205ENST00000561673 SYNCQ9H7C4 482 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 FBRSQ9HAH7 460 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 SUSD2Q9UGT4 822 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 SLCO3A1Q9UIG8 710 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 ERVW-1Q9UQF0 538 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 CEP83Q9Y592 693 aa10.63□□□□□ -0.71
CLK3-205ENST00000561673 A0A1B0GTW7 788 aa10.62□□□□□ -0.71
CLK3-205ENST00000561673 FAM170AA1A519 330 aa10.62□□□□□ -0.71
CLK3-205ENST00000561673 TTC34A8MYJ7 566 aa10.62□□□□□ -0.71
CLK3-205ENST00000561673 BCAT2O15382 392 aaPredicted RBP10.62□□□□□ -0.71
CLK3-205ENST00000561673 SIN3BO75182 1162 aa10.62□□□□□ -0.71
CLK3-205ENST00000561673 DAB1O75553 588 aa10.62□□□□□ -0.71
CLK3-205ENST00000561673 MOCS3O95396 460 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms