RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SLC6A11P48066 632 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 ZXDBP98169 803 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 CCDC15Q0P6D6 951 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 RETSATQ6NUM9 610 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 FBXL22Q6P050 247 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 ZC3H14Q6PJT7 736 aaKnown RBP11.04□□□□□ -0.64
TPM1-229ENST00000561242 SERPINA13PQ6UXR4 307 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 SETD3Q86TU7 594 aaPredicted RBP11.04□□□□□ -0.64
TPM1-229ENST00000561242 RHOT1Q8IXI2 618 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 SPEM1Q8N4L4 309 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 UBL4BQ8N7F7 174 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 TERB1Q8NA31 727 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 FIBINQ8TAL6 211 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 UBE2Q2Q8WVN8 375 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 ATRIPQ8WXE1 791 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 NT5C3BQ969T7 300 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 TRIM44Q96DX7 344 aaPredicted RBP11.04□□□□□ -0.64
TPM1-229ENST00000561242 CHFRQ96EP1 664 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 C2orf49Q9BVC5 232 aaPredicted RBP11.04□□□□□ -0.64
TPM1-229ENST00000561242 RAB23Q9ULC3 237 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 RAMP2O60895 175 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 RNF40O75150 1001 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 PROSCO94903 275 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 EGFP01133 1207 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 PENKP01210 267 aaPredicted RBP11.03□□□□□ -0.64
TPM1-229ENST00000561242 IGLV3-25P01717 112 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 RHOQP17081 205 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 TARSP26639 723 aaKnown RBP11.03□□□□□ -0.64
TPM1-229ENST00000561242 MIPP30301 263 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 SERPINB6P35237 376 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 MAPKAPK2P49137 400 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 VAV2P52735 878 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 RPS24P62847 133 aaKnown RBP11.03□□□□□ -0.64
TPM1-229ENST00000561242 CCDC173Q0VFZ6 552 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 PDK2Q15119 407 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 FYB2Q5VWT5 728 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 MBLAC2Q68D91 279 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 POTEHQ6S545 545 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 BZW1Q7L1Q6 419 aaKnown RBP11.03□□□□□ -0.64
TPM1-229ENST00000561242 TFAP2DQ7Z6R9 452 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 DSG4Q86SJ6 1040 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 METTL3Q86U44 580 aaKnown RBP11.03□□□□□ -0.64
TPM1-229ENST00000561242 DNAAF5Q86Y56 855 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 CCDC50Q8IVM0 306 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 LRRC8AQ8IWT6 810 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 CCAR2Q8N163 923 aaKnown RBP11.03□□□□□ -0.64
TPM1-229ENST00000561242 LZTR1Q8N653 840 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 DTWD2Q8NBA8 298 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 TSTD1Q8NFU3 115 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 RPLP0P6Q8NHW5 317 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 KIAA1524Q8TCG1 905 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 GANCQ8TET4 914 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 CENPIQ92674 756 aaPredicted RBP11.03□□□□□ -0.64
TPM1-229ENST00000561242 KHSRPQ92945 711 aaKnown RBP eCLIP11.03□□□□□ -0.64
TPM1-229ENST00000561242 SYT11Q9BT88 431 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 CALN1Q9BXU9 219 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 ELOVL2Q9NXB9 296 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 PPARGC1AQ9UBK2 798 aaKnown RBP11.03□□□□□ -0.64
TPM1-229ENST00000561242 FZD10Q9ULW2 581 aa11.03□□□□□ -0.64
TPM1-229ENST00000561242 A0A0A6YYK5 440 aaPredicted RBP11.02□□□□□ -0.65
TPM1-229ENST00000561242 ARHGAP42A6NI28 874 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 ARNTLO00327 626 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 MAP3K13O43283 966 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 KLF8O95600 359 aaPredicted RBP11.02□□□□□ -0.65
TPM1-229ENST00000561242 ZFXP17010 805 aaPredicted RBP11.02□□□□□ -0.65
TPM1-229ENST00000561242 CTNNA2P26232 953 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 NTSR1P30989 418 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 MAN1A1P33908 653 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 DGKEP52429 567 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 CDH6P55285 790 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 HDAC4P56524 1084 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 PITX1P78337 314 aaPredicted RBP11.02□□□□□ -0.65
TPM1-229ENST00000561242 CSTF1Q05048 431 aaKnown RBP11.02□□□□□ -0.65
TPM1-229ENST00000561242 RAD51Q06609 339 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 SLC20A2Q08357 652 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 POLD3Q15054 466 aaPredicted RBP11.02□□□□□ -0.65
TPM1-229ENST00000561242 ZNF783Q6ZMS7 281 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 C1orf210Q8IVY1 113 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 FAM217AQ8IXS0 508 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 CCDC33Q8N5R6 958 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 WBP2Q969T9 261 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 KCNH6Q9H252 994 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 ATP13A1Q9HD20 1204 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.02□□□□□ -0.65
TPM1-229ENST00000561242 AMFRQ9UKV5 643 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 NCKAP1Q9Y2A7 1128 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 SLC27A6Q9Y2P4 619 aa11.02□□□□□ -0.65
TPM1-229ENST00000561242 ILVBLA1L0T0 632 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 MACROD2A1Z1Q3 448 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 ZSCAN5CA6NGD5 496 aaPredicted RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 CBX4O00257 560 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 GFRA2O00451 464 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 EPHX1P07099 455 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 SRPRAP08240 638 aaKnown RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 DLDP09622 509 aaKnown RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 CHRNB1P11230 501 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 HOXB2P14652 356 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 TFE3P19532 575 aaPredicted RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 HOXD9P28356 352 aaPredicted RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 SLC6A4P31645 630 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms