RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 CD63P08962 238 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 TKTP29401 623 aaKnown RBP4.97□□□□□ -1.61
PSMA4-221ENST00000560842 GRK5P34947 590 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 CHKAP35790 457 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 ARHGAP25P42331 645 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 GRK6P43250 576 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 TRAPPC10P48553 1259 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 SLC12A2P55011 1212 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 DCTN1Q14203 1278 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 ANKRD40Q6AI12 368 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 SULT6B1Q6IMI4 303 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 JMJD6Q6NYC1 403 aaPredicted RBP4.97□□□□□ -1.61
PSMA4-221ENST00000560842 SLC2A7Q6PXP3 512 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 TECPR1Q7Z6L1 1165 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 PIP4P1Q86T03 277 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 RHPN2Q8IUC4 686 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 CCDC117Q8IWD4 279 aaPredicted RBP4.97□□□□□ -1.61
PSMA4-221ENST00000560842 PAQR4Q8N4S7 273 aaPredicted RBP4.97□□□□□ -1.61
PSMA4-221ENST00000560842 ADPRHL1Q8NDY3 354 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 TRAPPC12Q8WVT3 735 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 HMGB4Q8WW32 186 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 PIGKQ92643 395 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 ATP2A3Q93084 1043 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 SDCCAG3Q96C92 435 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 TRIM2Q9C040 744 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 TWSG1Q9GZX9 223 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 TXNRD2Q9NNW7 524 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 PI4KBQ9UBF8 816 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 RAB21Q9UL25 225 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 TRPC5Q9UL62 973 aaPredicted RBP4.97□□□□□ -1.61
PSMA4-221ENST00000560842 FAM90A20PA6NIJ5 464 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 KCNU1A8MYU2 1149 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 CYP21A2P08686 494 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 AKR1A1P14550 325 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 TFEBP19484 476 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 TGM2P21980 687 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 HOXD9P28356 352 aaPredicted RBP4.96□□□□□ -1.62
PSMA4-221ENST00000560842 MTA1Q13330 715 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 GALNTL6Q49A17 601 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 SLC9C1Q4G0N8 1177 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 AWAT2Q6E213 333 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 C16orf52Q8NHV5 167 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 CPT1BQ92523 772 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 ZNF347Q96SE7 839 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 HTATIP2Q9BUP3 242 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 SORBS1Q9BX66 1292 aaKnown RBP4.96□□□□□ -1.62
PSMA4-221ENST00000560842 PRDM16Q9HAZ2 1276 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 TUBA8Q9NY65 449 aaPredicted RBP4.96□□□□□ -1.62
PSMA4-221ENST00000560842 NDUFAF4Q9P032 175 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 RIPOR2Q9Y4F9 1068 aa4.96□□□□□ -1.62
PSMA4-221ENST00000560842 COPG1Q9Y678 874 aaKnown RBP4.96□□□□□ -1.62
PSMA4-221ENST00000560842 ZMYM2Q9UBW7 1377 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 HEXIM1O94992 359 aaKnown RBP4.95□□□□□ -1.62
PSMA4-221ENST00000560842 ST6GAL1P15907 406 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 ID2Q02363 134 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 STIM1Q13586 685 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 GRAMD1BQ3KR37 738 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 ANXA2RQ3ZCQ2 193 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 Q4G0T1 1027 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 DGAT2L7PQ6IED9 249 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 FAM57BQ71RH2 274 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 RTL10Q7L3V2 364 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 GALNT15Q8N3T1 639 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 MYCT1Q8N699 235 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 ARL14EPQ8N8R7 260 aaPredicted RBP4.95□□□□□ -1.62
PSMA4-221ENST00000560842 OR6Y1Q8NGX8 325 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 ELAC1Q9H777 363 aaKnown RBP4.95□□□□□ -1.62
PSMA4-221ENST00000560842 MOV10Q9HCE1 1003 aaKnown RBP4.95□□□□□ -1.62
PSMA4-221ENST00000560842 G6PC2Q9NQR9 355 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 SLC22A11Q9NSA0 550 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 TMLHEQ9NVH6 421 aa4.95□□□□□ -1.62
PSMA4-221ENST00000560842 LMTK3Q96Q04 1460 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3DA0A087WVF3 549 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3IA0A087WXS9 549 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3EA0A087X179 549 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3KA0A087X1G2 549 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3BA6NDS4 549 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3FA6NER0 549 aaPredicted RBP4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3LB9A6J9 549 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 H0Y3Z8 333 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TLX3O43711 291 aaPredicted RBP4.94□□□□□ -1.62
PSMA4-221ENST00000560842 FGBP02675 491 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3HP0C7X1 549 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 SERPINA4P29622 427 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 ADPRHP54922 357 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 SHC2P98077 582 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 RAPGEF1Q13905 1077 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 SEMA3AQ14563 771 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 SMAD1Q15797 465 aaKnown RBP4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3GQ6DHY5 549 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3CQ6IPX1 549 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 CNGA4Q8IV77 575 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 TBC1D3Q8IZP1 549 aaPredicted RBP4.94□□□□□ -1.62
PSMA4-221ENST00000560842 FAM47BQ8NA70 645 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 DENND1AQ8TEH3 1009 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 CLEC4CQ8WTT0 213 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 THAP4Q8WY91 577 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 KAT2BQ92831 832 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 CUL5Q93034 780 aa4.94□□□□□ -1.62
PSMA4-221ENST00000560842 LTV1Q96GA3 475 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms