RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 DCLRE1AQ6PJP8 1040 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 KYAT3Q6YP21 454 aaKnown RBP9.98□□□□□ -0.81
RTF1-206ENST00000560447 FAM47EQ6ZV65 393 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 OTOAQ7RTW8 1153 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 CCDC91Q7Z6B0 441 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 LRRC49Q8IUZ0 686 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 CTAGE3PQ8IX95 158 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 AGGF1Q8N302 714 aaeCLIP9.98□□□□□ -0.81
RTF1-206ENST00000560447 LZTR1Q8N653 840 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 FITM2Q8N6M3 262 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 KLHDC9Q8NEP7 349 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 ZMIZ2Q8NF64 920 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 KLHL29Q96CT2 875 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 P2RY11Q96G91 374 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 PCED1BQ96HM7 432 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 ZFP42Q96MM3 310 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 C7orf26Q96N11 449 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 TSGA13Q96PP4 275 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 LRRC37BQ96QE4 947 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 LPIN3Q9BQK8 851 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 TACO1Q9BSH4 297 aaKnown RBP9.98□□□□□ -0.81
RTF1-206ENST00000560447 TSSK1BQ9BXA7 367 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 ECT2Q9H8V3 914 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 DMAP1Q9NPF5 467 aaPredicted RBP9.98□□□□□ -0.81
RTF1-206ENST00000560447 PIGVQ9NUD9 493 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 GRID1Q9ULK0 1009 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 MTO1Q9Y2Z2 717 aaKnown RBP9.98□□□□□ -0.81
RTF1-206ENST00000560447 PLLPQ9Y342 182 aa9.98□□□□□ -0.81
RTF1-206ENST00000560447 I3L4J1 428 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 CLDN5O00501 218 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 FGF10O15520 208 aaPredicted RBP9.97□□□□□ -0.81
RTF1-206ENST00000560447 GLRA3O75311 464 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 RFPL1O75677 317 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 EOMESO95936 686 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 IGLV3-25P01717 112 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 POLBP06746 335 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 COL6A1P12109 1028 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 ERCC2P18074 760 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 ACAT1P24752 427 aaKnown RBP9.97□□□□□ -0.81
RTF1-206ENST00000560447 HADHAP40939 763 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 SERPINB4P48594 390 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 NPY2RP49146 381 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 CLCNKBP51801 687 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 TSPY1Q01534 308 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 NRG1Q02297 640 aaPredicted RBP9.97□□□□□ -0.81
RTF1-206ENST00000560447 MGAT5Q09328 741 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 NIPAL4Q0D2K0 466 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 AP1B1Q10567 949 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 WASHC5Q12768 1159 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 CRHR2Q13324 411 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 ACBD5Q5T8D3 534 aaPredicted RBP9.97□□□□□ -0.81
RTF1-206ENST00000560447 KIAA0319Q5VV43 1072 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 C4orf50Q6ZRC1 276 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 BHLHA9Q7RTU4 235 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 PRPF39Q86UA1 669 aaKnown RBP9.97□□□□□ -0.81
RTF1-206ENST00000560447 CCDC117Q8IWD4 279 aaPredicted RBP9.97□□□□□ -0.81
RTF1-206ENST00000560447 SLC7A14Q8TBB6 771 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 SH3TC2Q8TF17 1288 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 DEPDC1BQ8WUY9 529 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 ATP2A3Q93084 1043 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 ISL2Q96A47 359 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 SERAC1Q96JX3 654 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 SUSD3Q96L08 255 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 RMDN2Q96LZ7 410 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 HAPLN3Q96S86 360 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 SRPK1Q96SB4 655 aaKnown RBP9.97□□□□□ -0.81
RTF1-206ENST00000560447 PKMYT1Q99640 499 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 COLEC11Q9BWP8 271 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 SEZ6LQ9BYH1 1024 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 LRMDAQ9H2I8 198 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 PRDM12Q9H4Q4 367 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 FAM96AQ9H5X1 160 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 LRRC40Q9H9A6 602 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 PLAC1Q9HBJ0 212 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 NSMCE4AQ9NXX6 385 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 DONSONQ9NYP3 566 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 SIRPGQ9P1W8 387 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 LNPEPQ9UIQ6 1025 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 MAD1L1Q9Y6D9 718 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 TLL2Q9Y6L7 1015 aa9.97□□□□□ -0.81
RTF1-206ENST00000560447 THSD7BQ9C0I4 1608 aa9.96□□□□□ -0.81
RTF1-206ENST00000560447 MYO16Q9Y6X6 1858 aa9.96□□□□□ -0.81
RTF1-206ENST00000560447 MYBPHLA2RUH7 354 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 MYADML2A6NDP7 307 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 YJEFN3A6XGL0 299 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 FAM155AB1AL88 458 aaPredicted RBP9.96□□□□□ -0.82
RTF1-206ENST00000560447 E7ENQ6 273 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 NRP1O14786 923 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 CACNG3O60359 315 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 AVILO75366 819 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 BEST1O76090 585 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 USP1O94782 785 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 AP2A1O95782 977 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 NCAM1P13591 858 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 DNAJB1P25685 340 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 HOXC13P31276 330 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 NDUFV1P49821 464 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 SCNN1GP51170 649 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 NRLP54845 237 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms