RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 LRMPQ12912 555 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 NNTQ13423 1086 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 CNGA2Q16280 664 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 CCDC40Q4G0X9 1142 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 DCAF12L1Q5VU92 463 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 CHST9Q7L1S5 443 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 KIAA0907Q7Z7F0 614 aaPredicted RBP14.1□□□□□ -0.15
SMAD3-214ENST00000560402 PPM1KQ8N3J5 372 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 UBA3Q8TBC4 463 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 SLC35F5Q8WV83 523 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 SORCS1Q8WY21 1168 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 ZCCHC14Q8WYQ9 949 aaKnown RBP14.1□□□□□ -0.15
SMAD3-214ENST00000560402 NDRG1Q92597 394 aaKnown RBP14.1□□□□□ -0.15
SMAD3-214ENST00000560402 AZIN2Q96A70 460 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 HSFY1Q96LI6 401 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 SERPINB11Q96P15 392 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 MED15Q96RN5 788 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 DDX50Q9BQ39 737 aaKnown RBP14.1□□□□□ -0.15
SMAD3-214ENST00000560402 NAA15Q9BXJ9 866 aaKnown RBP14.1□□□□□ -0.15
SMAD3-214ENST00000560402 TMEM245Q9H330 911 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 ABCB8Q9NUT2 735 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 PYCARDQ9ULZ3 195 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 PCDHB9Q9Y5E1 797 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 PCDHB4Q9Y5E5 795 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 AKAP13Q12802 2813 aa14.1□□□□□ -0.15
SMAD3-214ENST00000560402 FAM221BA6H8Z2 402 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 LGALS16A8MUM7 142 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 AKR1B15C9JRZ8 316 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-214ENST00000560402 BCAT2O15382 392 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-214ENST00000560402 MSI1O43347 362 aaKnown RBP14.09□□□□□ -0.15
SMAD3-214ENST00000560402 TSPAN3O60637 253 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 TUBB4AP04350 444 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 DLDP09622 509 aaKnown RBP14.09□□□□□ -0.15
SMAD3-214ENST00000560402 LCP1P13796 627 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 MATKP42679 507 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 GCNT1Q02742 428 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 TRIP6Q15654 476 aaKnown RBP14.09□□□□□ -0.15
SMAD3-214ENST00000560402 MEA1Q16626 185 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 TSR1Q2NL82 804 aaKnown RBP14.09□□□□□ -0.15
SMAD3-214ENST00000560402 TTC31Q49AM3 519 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-214ENST00000560402 RAB44Q7Z6P3 723 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-214ENST00000560402 OR2I1PQ8NGU4 316 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 TRIM62Q9BVG3 475 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 MIR1-1HGQ9H1L0 117 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 OSGEPQ9NPF4 335 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 TAB2Q9NYJ8 693 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 KLK13Q9UKR3 277 aa14.09□□□□□ -0.15
SMAD3-214ENST00000560402 NUMA1Q14980 2115 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 A0A1W2PQC6 194 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 ARHGAP6O43182 974 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 SH3BP5O60239 455 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 ACSL4O60488 711 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 DNTTP04053 509 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 ASLP04424 464 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 PRKCSHP14314 528 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-214ENST00000560402 POLR2EP19388 210 aaKnown RBP14.08□□□□□ -0.16
SMAD3-214ENST00000560402 MAOBP27338 520 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 TBX4P57082 545 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 CCZ1BP86790 482 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 CCZ1P86791 482 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-214ENST00000560402 UBXN1Q04323 297 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 PIK3R6Q5UE93 754 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 MBLAC2Q68D91 279 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 PMF1Q6P1K2 205 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 GLRX5Q86SX6 157 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 ADIPOR2Q86V24 386 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 CACUL1Q86Y37 369 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 HJURPQ8NCD3 748 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-214ENST00000560402 ADAMTS14Q8WXS8 1223 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 TFAP2BQ92481 460 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 PANX2Q96RD6 677 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 VPS16Q9H269 839 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 SUN2Q9UH99 717 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 SCML1Q9UN30 329 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 APOBEC2Q9Y235 224 aaKnown RBP14.08□□□□□ -0.16
SMAD3-214ENST00000560402 PCDHGB2Q9Y5G2 931 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 ZZEF1O43149 2961 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 WDFY3Q8IZQ1 3526 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 TMEM131Q92545 1883 aa14.08□□□□□ -0.16
SMAD3-214ENST00000560402 GOLGA6L9A6NEM1 432 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 FLRT2O43155 660 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 ZSCAN12O43309 604 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 TBL1XO60907 577 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 HLA-EP13747 358 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 BRD2P25440 801 aaKnown RBP14.07□□□□□ -0.16
SMAD3-214ENST00000560402 ACADSBP45954 432 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 RGS7P49802 495 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 AFF3P51826 1226 aaKnown RBP14.07□□□□□ -0.16
SMAD3-214ENST00000560402 FAM193AP78312 1265 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 SFSWAPQ12872 951 aaKnown RBP14.07□□□□□ -0.16
SMAD3-214ENST00000560402 TBX2Q13207 712 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-214ENST00000560402 PTPRNQ16849 979 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 FAM133BQ5BKY9 247 aaKnown RBP14.07□□□□□ -0.16
SMAD3-214ENST00000560402 ZNF776Q68DI1 518 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-214ENST00000560402 BEND5Q7L4P6 421 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 MFN1Q8IWA4 741 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 CCDC117Q8IWD4 279 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-214ENST00000560402 KDM1BQ8NB78 822 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 LMO3Q8TAP4 145 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 CYB5D2Q8WUJ1 264 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms