RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TCEAL3Q969E4 200 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 IGSF8Q969P0 613 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 NT5C3BQ969T7 300 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 TBCBQ99426 244 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 IRX2Q9BZI1 471 aaPredicted RBP12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 RAB6CQ9H0N0 254 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 MTG2Q9H4K7 406 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 CBX8Q9HC52 389 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 TMEM59LQ9UK28 342 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 CYP8B1Q9UNU6 501 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 SNX10Q9Y5X0 201 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 NCOR2Q9Y618 2525 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 PI4KAP42356 2102 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 NUMA1Q14980 2115 aa12.05□□□□□ -0.48
RABGGTA-216ENST00000560243 IGHV1OR15-9A0A0B4J2B8 117 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 BCLAF3A2AJT9 711 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 F5H5T6 163 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 NPC1O15118 1278 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 PAGE1O75459 146 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 EPHX1P07099 455 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 DLDP09622 509 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 SLC2A3P11169 496 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 ABCB4P21439 1286 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 SCNN1AP37088 669 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 CSKP41240 450 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 CTSOP43234 321 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 DHPSP49366 369 aaPredicted RBP12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 CXCR3P49682 368 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 COPAP53621 1224 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 LMNB2Q03252 620 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 PTP4A2Q12974 167 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 CDH18Q13634 790 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 AUHQ13825 339 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 STARD3Q14849 445 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 FNDC3BQ53EP0 1204 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 LUZP1Q86V48 1076 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 APCDD1Q8J025 514 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 CCAR2Q8N163 923 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 BAP1Q92560 729 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 MYO19Q96H55 970 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 SPACA7Q96KW9 195 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 CFAP57Q96MR6 1250 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 C11orf70Q9BRQ4 267 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 SIK2Q9H0K1 926 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 TMEM245Q9H330 911 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 METTL5Q9NRN9 209 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 SLC12A6Q9UHW9 1150 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 VANGL2Q9ULK5 521 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 PLA2G4CQ9UP65 541 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 DAAM1Q9Y4D1 1078 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 PCDHGA5Q9Y5G8 931 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 HS3ST4Q9Y661 456 aa12.04□□□□□ -0.48
RABGGTA-216ENST00000560243 A0A1B0GTH6 734 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 TYW5A2RUC4 315 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 PATE3B3GLJ2 98 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 H0Y626 953 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 ZBTB24O43167 697 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 SYNCRIPO60506 623 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 CAVIN2O95810 425 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 ZNF806P0C7X5 589 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 UNGP13051 313 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 POLR2EP19388 210 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 DEUP1Q05D60 604 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 CAMK2GQ13555 558 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 CLEC16AQ2KHT3 1053 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 SLC25A52Q3SY17 297 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 PITRM1Q5JRX3 1037 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 ARTNQ5T4W7 220 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 E4F1Q66K89 784 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 CXorf57Q6NSI4 855 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 TRIM72Q6ZMU5 477 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 LPCAT2Q7L5N7 544 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 IRF2BP2Q7Z5L9 587 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 C11orf74Q86VG3 221 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 TMPRSS6Q8IU80 811 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 MSANTD4Q8NCY6 345 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 OR52K2Q8NGK3 314 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 JOSD2Q8TAC2 188 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 TTC17Q96AE7 1141 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 PGAP3Q96FM1 320 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 MRGPRX3Q96LB0 322 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 AGPAT1Q99943 283 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 TKTL2Q9H0I9 626 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 PRDM16Q9HAZ2 1276 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 ARHGEF38Q9NXL2 777 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 DLL3Q9NYJ7 618 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 STAP1Q9ULZ2 295 aa12.03□□□□□ -0.48
RABGGTA-216ENST00000560243 CNTN5O94779 1100 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 ATP5BP06576 529 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 PDGFRAP16234 1089 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 ITPKAP23677 461 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 MZF1P28698 734 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 ATP11AP98196 1134 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 RPL6Q02878 288 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 BYSLQ13895 437 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 ZSCAN23Q3MJ62 389 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 SH3PXD2AQ5TCZ1 1133 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 CYP2U1Q7Z449 544 aa12.02□□□□□ -0.49
RABGGTA-216ENST00000560243 BNIPLQ7Z465 357 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms