RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 FBXL22Q6P050 247 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 MFN1Q8IWA4 741 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 KIAA2013Q8IYS2 634 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 LGI2Q8N0V4 545 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 CFAP52Q8N1V2 620 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 SLC30A5Q8TAD4 765 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 SORCS1Q8WY21 1168 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 CENPIQ92674 756 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 PCMTD1Q96MG8 357 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 AGPAT1Q99943 283 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 MKRN2Q9H000 416 aaKnown RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 WDCPQ9H6R7 721 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 SEMA4GQ9NTN9 838 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 KIAA1522Q9P206 1035 aaPredicted RBP13.66□□□□□ -0.22
SMAD3-213ENST00000560175 RAD54BQ9Y620 910 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 HS3ST4Q9Y661 456 aa13.66□□□□□ -0.22
SMAD3-213ENST00000560175 A0A1B0GVM2 712 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 BCLAF3A2AJT9 711 aaKnown RBP13.65□□□□□ -0.22
SMAD3-213ENST00000560175 TYW5A2RUC4 315 aaKnown RBP13.65□□□□□ -0.22
SMAD3-213ENST00000560175 TCAF2A6NFQ2 919 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 C2CD4BA6NLJ0 364 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 DRGXA6NNA5 263 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 F5H5T6 163 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 ZNF217O75362 1048 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 ADCY5O95622 1261 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 IGLV3-19P01714 112 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 ASLP04424 464 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 ATP5BP06576 529 aaKnown RBP13.65□□□□□ -0.22
SMAD3-213ENST00000560175 CCDC172P0C7W6 258 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 PRKCHP24723 683 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 PRKCIP41743 596 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 RNASE9P60153 205 aaKnown RBP13.65□□□□□ -0.22
SMAD3-213ENST00000560175 NME3Q13232 169 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 ELF2Q15723 593 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 ZSCAN23Q3MJ62 389 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 MMS22LQ6ZRQ5 1243 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 MON1BQ7L1V2 547 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 LUZP1Q86V48 1076 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 CHSY1Q86X52 802 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 FRMD1Q8N878 549 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 RLN3Q8WXF3 142 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 IGSF8Q969P0 613 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 ALG14Q96F25 216 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 MRGPRX3Q96LB0 322 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 HAPLN3Q96S86 360 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 TBCBQ99426 244 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 CIPCQ9C0C6 399 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 ITM2CQ9NQX7 267 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 DLL3Q9NYJ7 618 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 STIM2Q9P246 746 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 USP36Q9P275 1121 aaKnown RBP13.65□□□□□ -0.22
SMAD3-213ENST00000560175 PLA2G4CQ9UP65 541 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 INVSQ9Y283 1065 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 TBC1D30Q9Y2I9 924 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 CHD5Q8TDI0 1954 aa13.65□□□□□ -0.22
SMAD3-213ENST00000560175 IGLV3-10A0A075B6K4 115 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 IGHV1OR15-9A0A0B4J2B8 117 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 SIGLEC16A6NMB1 481 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 PRR5-ARHGAP8B1AHC4 643 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 POLR2EP19388 210 aaKnown RBP13.64□□□□□ -0.23
SMAD3-213ENST00000560175 PTPN9P43378 593 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 SULT1E1P49888 294 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 ARHGAP8P85298 464 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 FANCCQ00597 558 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 DEUP1Q05D60 604 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
SMAD3-213ENST00000560175 STARD3Q14849 445 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 PPP1R15BQ5SWA1 713 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 PEAR1Q5VY43 1037 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-213ENST00000560175 CXorf57Q6NSI4 855 aaKnown RBP13.64□□□□□ -0.23
SMAD3-213ENST00000560175 C14orf80Q86SX3 495 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 CCAR2Q8N163 923 aaKnown RBP13.64□□□□□ -0.23
SMAD3-213ENST00000560175 C3orf20Q8ND61 904 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 RNF34Q969K3 372 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 VCPIP1Q96JH7 1222 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 HINFPQ9BQA5 517 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 TKTL2Q9H0I9 626 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 ARRDC1-AS1Q9H2J1 176 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 FBRSQ9HAH7 460 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 ADAM22Q9P0K1 906 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 BCCIPQ9P287 314 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMAD3-213ENST00000560175 PAXBP1Q9Y5B6 917 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 OR51B4Q9Y5P0 310 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 ITIH6Q6UXX5 1313 aa13.64□□□□□ -0.23
SMAD3-213ENST00000560175 CACNA1AO00555 2505 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 GOLGA8SH3BPF8 625 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 CLDN11O75508 207 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 CALB1P05937 261 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 SRPRAP08240 638 aaKnown RBP13.63□□□□□ -0.23
SMAD3-213ENST00000560175 GZMAP12544 262 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 CSKP41240 450 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 NSFP46459 744 aaKnown RBP13.63□□□□□ -0.23
SMAD3-213ENST00000560175 ATXN1P54253 815 aaKnown RBP13.63□□□□□ -0.23
SMAD3-213ENST00000560175 OXCT1P55809 520 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 NRG1Q02297 640 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-213ENST00000560175 LMNB2Q03252 620 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 ARID5AQ03989 594 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 CDH18Q13634 790 aa13.63□□□□□ -0.23
SMAD3-213ENST00000560175 PLEKHG6Q3KR16 790 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms