RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TYMPP19971 482 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 LRRC36Q1X8D7 754 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 GPR158Q5T848 1215 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 RGS9BPQ6ZS82 235 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 TAS1R3Q7RTX0 852 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 RASSF3Q86WH2 238 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 TRIML2Q8N7C3 387 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 ACTRT1Q8TDG2 376 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 SNRNP25Q9BV90 132 aaKnown RBP10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 ADAMTS10Q9H324 1103 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 HAO1Q9UJM8 370 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 A0A1W2PQH9 124 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 ZNF263O14978 683 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 UBTFL6P0CB48 400 aaPredicted RBP10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 KITP10721 976 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 COL6A1P12109 1028 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 SLC11A1P49279 550 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 GEMP55040 296 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 CCNG2Q16589 344 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 TMCO4Q5TGY1 634 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 ATG16L1Q676U5 607 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 C3orf62Q6ZUJ4 267 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 FRA10AC1Q70Z53 315 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 CRLF3Q8IUI8 442 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 PLK2Q9NYY3 685 aa10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 SAE1Q9UBE0 346 aaPredicted RBP10.93□□□□□ -0.66
CARMIL3-202ENST00000559694 NCAM2O15394 837 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 ERBB2P04626 1255 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 HNRNPCP07910 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 RENBPP51606 427 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 TMC5Q6UXY8 1006 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 ZNF280BQ86YH2 543 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 LZTR1Q8N653 840 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 PPP1R2P1Q96PQ5 205 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 HNRNPABQ99729 332 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 PKP3Q9Y446 797 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 MSI1O43347 362 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 LZTS3O60299 673 aaPredicted RBP10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 CYP1A2P05177 515 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 KCNE1P15382 129 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 FLT3P36888 993 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 ESRRGP62508 458 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 ASPHQ12797 758 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 KRT80Q6KB66 452 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 B3GNT9Q6UX72 402 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 AGMOQ6ZNB7 445 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 PPIL6Q8IXY8 311 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 PLEKHO2Q8TD55 490 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 LRGUKQ96M69 825 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 SH3GL2Q99962 352 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 C20orf96Q9NUD7 363 aaPredicted RBP10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 G3BP2Q9UN86 482 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 GOLGA8RI6L899 631 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 GPR32O75388 356 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 PFKMP08237 780 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 KDELR1P24390 212 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 MTA1Q13330 715 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 ZRANB3Q5FWF4 1079 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 C4orf22Q6V702 233 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 SLC26A7Q8TE54 656 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 PPWD1Q96BP3 646 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 ANLNQ9NQW6 1124 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 AAR2Q9Y312 384 aaKnown RBP10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 SDK1Q7Z5N4 2213 aa10.92□□□□□ -0.66
CARMIL3-202ENST00000559694 CFLARO15519 480 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 SHOX2O60902 331 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 GMNNO75496 209 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 POLBP06746 335 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 RFC2P35250 354 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 FDFT1P37268 417 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 VHLP40337 213 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 MAGEA4P43358 317 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 STARD3Q14849 445 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 TMC3Q7Z5M5 1100 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 WDR75Q8IWA0 830 aaKnown RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 TRPV1Q8NER1 839 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 USP13Q92995 863 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 CCDC124Q96CT7 223 aaKnown RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 MCRS1Q96EZ8 462 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 EGFL8Q99944 293 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 SEMA4AQ9H3S1 761 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 NRDE2Q9H7Z3 1164 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 SCUBE2Q9NQ36 999 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 CNTN3Q9P232 1028 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 GGA2Q9UJY4 613 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 KAT6AQ92794 2004 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 LY75O60449 1722 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 HNRNPCL1O60812 293 aaKnown RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 SERPINF2P08697 491 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 KDSRQ06136 332 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 GET4Q7L5D6 327 aaPredicted RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 LINC00523Q86TU6 105 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 COLGALT1Q8NBJ5 622 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 AGAP11Q8TF27 550 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 DTNBP1Q96EV8 351 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 ZMAT2Q96NC0 199 aaKnown RBP10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 ERVK-5Q9HDB9 667 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 HMGXB4Q9UGU5 601 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 MID2Q9UJV3 735 aa10.91□□□□□ -0.66
CARMIL3-202ENST00000559694 AGPSO00116 658 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 220.1 ms