RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 MFSD2AQ8NA29 543 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 OR14C36Q8NHC7 312 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 LARP4BQ92615 738 aaKnown RBP12.39□□□□□ -0.43
SMAD3-206ENST00000558739 GOLGA1Q92805 767 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 CCDC97Q96F63 343 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-206ENST00000558739 MYOCQ99972 504 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 SEMA3CQ99985 751 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 FUCA2Q9BTY2 467 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 SLC2A11Q9BYW1 496 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 ABCG4Q9H172 646 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 SLC25A18Q9H1K4 315 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 CSNK1G1Q9HCP0 422 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 PLEKHB1Q9UF11 243 aaPredicted RBP12.39□□□□□ -0.43
SMAD3-206ENST00000558739 EXOC7Q9UPT5 735 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 PLAAQ9Y263 795 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
SMAD3-206ENST00000558739 AFMP43652 599 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 DUSP3P51452 185 aaPredicted RBP12.38□□□□□ -0.43
SMAD3-206ENST00000558739 ASIC1P78348 528 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 GUSBP11Q6P575 273 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 FAM217AQ8IXS0 508 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 SYCP3Q8IZU3 236 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 CPXM2Q8N436 756 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 CALML4Q96GE6 196 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 OMDQ99983 421 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.38□□□□□ -0.43
SMAD3-206ENST00000558739 FZD4Q9ULV1 537 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 ZNF510Q9Y2H8 683 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 TACC2O95359 2948 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 CCDC168Q8NDH2 2452 aa12.38□□□□□ -0.43
SMAD3-206ENST00000558739 GJB6O95452 261 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 GP1BAP07359 652 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 RNF224P0DH78 156 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 THEGLP0DJG4 465 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 SLC8A1P32418 973 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 CDKN3Q16667 212 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 SLC45A4Q5BKX6 768 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 ZNF542PQ5EBM4 170 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 C9orf64Q5T6V5 341 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 KIAA0907Q7Z7F0 614 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-206ENST00000558739 ARL14Q8N4G2 192 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMAD3-206ENST00000558739 ZNF564Q8TBZ8 553 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-206ENST00000558739 WFIKKN2Q8TEU8 576 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 DNAJC19Q96DA6 116 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 MRGPRX3Q96LB0 322 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 LRRC4CQ9HCJ2 640 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 KIF3AQ9Y496 699 aa12.37□□□□□ -0.43
SMAD3-206ENST00000558739 TBC1D3DA0A087WVF3 549 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 TBC1D3IA0A087WXS9 549 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 TBC1D3EA0A087X179 549 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 TBC1D3KA0A087X1G2 549 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 TBC1D3FA6NER0 549 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-206ENST00000558739 ZNF233A6NK53 670 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 TTC34A8MYJ7 566 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 TBC1D3LB9A6J9 549 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 K7ESM1 405 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 PIAS2O75928 621 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 ITGA2BP08514 1039 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 TBC1D3HP0C7X1 549 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 HGFP14210 728 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 SLC5A2P31639 672 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 DRD3P35462 400 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 UBA7P41226 1012 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 CTSOP43234 321 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-206ENST00000558739 NUMBP49757 651 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 E2F5Q15329 346 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 HNRNPA1L2Q32P51 320 aaKnown RBP12.36□□□□□ -0.43
SMAD3-206ENST00000558739 TBC1D3GQ6DHY5 549 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 TBC1D3CQ6IPX1 549 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 RBM44Q6ZP01 1051 aaKnown RBP12.36□□□□□ -0.43
SMAD3-206ENST00000558739 TBC1D3Q8IZP1 549 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-206ENST00000558739 AHI1Q8N157 1196 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 RASSF8Q8NHQ8 419 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 HPS3Q969F9 1004 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 CCDC127Q96BQ5 260 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 NOX5Q96PH1 765 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 FAM129BQ96TA1 746 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 CGRRF1Q99675 332 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 FZD3Q9NPG1 666 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 GEMIN8Q9NWZ8 242 aaKnown RBP12.36□□□□□ -0.43
SMAD3-206ENST00000558739 CYTH4Q9UIA0 394 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 SCML1Q9UN30 329 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 FBN3Q75N90 2809 aa12.36□□□□□ -0.43
SMAD3-206ENST00000558739 NAV3Q8IVL0 2385 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 SDK2Q58EX2 2172 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-206ENST00000558739 SLC12A8A0AV02 714 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 CPED1A4D0V7 1026 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 CLSTN1O94985 981 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 FAM200BP0CF97 657 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 VAV1P15498 845 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 PRLRP16471 622 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 GOT1P17174 413 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 TNNI1P19237 187 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 HOXD13P35453 343 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 CASP4P49662 377 aa12.35□□□□□ -0.43
SMAD3-206ENST00000558739 KIF11P52732 1056 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms