RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 ARL8AQ96BM9 186 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 ATP6V1G3Q96LB4 118 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 ZSWIM1Q9BR11 485 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 NACA2Q9H009 215 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 CARD9Q9H257 536 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 FAM114A2Q9NRY5 505 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.69□□□□□ -0.73e-7■■■□□ 15.3
TPM1-212ENST00000558347 TBC1D14Q9P2M4 693 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 NCDNQ9UBB6 729 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 RSPH14Q9UHP6 348 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 PACSIN2Q9UNF0 486 aaPredicted RBP10.69□□□□□ -0.7
TPM1-212ENST00000558347 SLC8A2Q9UPR5 921 aa10.69□□□□□ -0.7
TPM1-212ENST00000558347 ANKRD62A6NC57 917 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 GOLGA6L10A6NI86 522 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 KRIT1O00522 736 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 LSM8O95777 96 aaKnown RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 CALCAP01258 141 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 FAM153BP0C7A2 387 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 ADH5P11766 374 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 CDH5P33151 784 aaPredicted RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 ATP5C1P36542 298 aaKnown RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 SEC13P55735 322 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 CENPCQ03188 943 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 CNGA2Q16280 664 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 GOLGA7BQ2TAP0 167 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 FAM153CQ494X1 144 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 RAB41Q5JT25 222 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 ACAD10Q6JQN1 1059 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 B4GALNT4Q76KP1 1039 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 DAAM2Q86T65 1068 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 PIGZQ86VD9 579 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 RHOT2Q8IXI1 618 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 KLHL7Q8IXQ5 586 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 ANKRD52Q8NB46 1076 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 TFAP2BQ92481 460 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 OTUB2Q96DC9 234 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 HHIPQ96QV1 700 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 LHX5Q9H2C1 402 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 TMBIM4Q9HC24 238 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 SEPT11Q9NVA2 429 aaKnown RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.68□□□□□ -0.7
TPM1-212ENST00000558347 FAM153AQ9UHL3 310 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 TSPAN16Q9UKR8 245 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 FAM187AA6NFU0 413 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 TMCO5BA8MYB1 307 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 EBAG9O00559 213 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 SART1O43290 800 aaKnown RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 KAT7O95251 611 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 ADH1CP00326 375 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 CPP00450 1065 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 FTLP02792 175 aaPredicted RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 CHRM1P11229 460 aaPredicted RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 CD19P15391 556 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 BRD2P25440 801 aaKnown RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 ECHS1P30084 290 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 CNR2P34972 360 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 EIF2DP41214 584 aaKnown RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 DNA2P51530 1060 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 NOMO3P69849 1222 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 MRPS25P82663 173 aaKnown RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 GAD2Q05329 585 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 KDSRQ06136 332 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 PDE4CQ08493 712 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 SIM2Q14190 667 aaPredicted RBP10.68□□□□□ -0.7
TPM1-212ENST00000558347 DMC1Q14565 340 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 SGO2Q562F6 1265 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 C2orf27AQ580R0 203 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 C10orf120Q5SQS8 335 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 AGBL2Q5U5Z8 902 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 C11orf63Q6NUN7 778 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 KLHDC10Q6PID8 442 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 FOXR1Q6PIV2 292 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 HTR3DQ70Z44 454 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 SYT13Q7L8C5 426 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 TMEM25Q86YD3 366 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 ETFBKMTQ8IXQ9 262 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 PHTF2Q8N3S3 785 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 NAT16Q8N8M0 369 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 C3orf20Q8ND61 904 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 USP33Q8TEY7 942 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 RAB17Q9H0T7 212 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 SPHK2Q9NRA0 654 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 TAS2R14Q9NYV8 317 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 LCMT1Q9UIC8 334 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 GGA2Q9UJY4 613 aa10.68□□□□□ -0.7
TPM1-212ENST00000558347 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.68□□□□□ -0.7
TPM1-212ENST00000558347 A0A087WUV0 522 aaPredicted RBP10.67□□□□□ -0.7
TPM1-212ENST00000558347 GOLGA6L10A0A0M3HER8 536 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 ESYT3A0FGR9 886 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 ZSCAN5CA6NGD5 496 aaPredicted RBP10.67□□□□□ -0.7
TPM1-212ENST00000558347 MIF4GDA9UHW6 222 aaKnown RBP10.67□□□□□ -0.7
TPM1-212ENST00000558347 O00370 1275 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 XPO1O14980 1071 aaKnown RBP10.67□□□□□ -0.7
TPM1-212ENST00000558347 TRIM24O15164 1050 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 DDX3YO15523 660 aaKnown RBP10.67□□□□□ -0.7
TPM1-212ENST00000558347 MTA2O94776 668 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 NR1D1P20393 614 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 TGM1P22735 817 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 GBP1P32455 592 aa10.67□□□□□ -0.7
TPM1-212ENST00000558347 PSEN1P49768 467 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms