RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 SERPINB11Q96P15 392 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 NECAB3Q96P71 396 aaPredicted RBP12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 LRRC3BQ96PB8 259 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 NPY6RQ99463 290 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 SMOC2Q9H3U7 446 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 KIF9Q9HAQ2 790 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 KCNK12Q9HB15 430 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 REXO2Q9Y3B8 237 aaKnown RBP12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 TMEM191CA6NGB0 347 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 TMEM110-MUSTN1A8MSY1 372 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 ANHXE9PGG2 379 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 ARHGAP6O43182 974 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 IRAK2O43187 625 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 CCP110O43303 1012 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 STC2O76061 302 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 MOCS2O96007 188 aaPredicted RBP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 CORO1AP31146 461 aaKnown RBP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 NOP2P46087 812 aaKnown RBP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 IDH3AP50213 366 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 ATXN1P54253 815 aaKnown RBP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 KRT83P78385 493 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 OGDHQ02218 1023 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 TRIP4Q15650 581 aaPredicted RBP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZNF77Q15935 545 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 SLC25A52Q3SY17 297 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 RAB6CQ53S08 254 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZC3H12AQ5D1E8 599 aaKnown RBP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 CC2D1AQ6P1N0 951 aaPredicted RBP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 DDX42Q86XP3 938 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 TREML1Q86YW5 311 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 SLC35G2Q8TBE7 412 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZNF564Q8TBZ8 553 aaPredicted RBP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 E2F7Q96AV8 911 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZFYVE19Q96K21 471 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 RAB6CQ9H0N0 254 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 TRPV4Q9HBA0 871 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 OSGEPQ9NPF4 335 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 RRN3Q9NYV6 651 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 CALCOCO1Q9P1Z2 691 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 STIM2Q9P246 746 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 ANAPC7Q9UJX3 599 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 LSM7Q9UK45 103 aaKnown RBP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 INTUQ9ULD6 942 aa12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 HBS1LQ9Y450 684 aaKnown RBP12.48□□□□□ -0.41
HMGB1P8-201ENST00000558211 ICMTO60725 284 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 ECI2O75521 394 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 BMP4P12644 408 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 DESP17661 470 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 PSMC3P17980 439 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 GDI1P31150 447 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 HARS2P49590 506 aaKnown RBP12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 KPNA1P52294 538 aaPredicted RBP12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZNF143P52747 638 aaPredicted RBP12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 NAP1L1P55209 391 aaKnown RBP12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 OTUD1Q5VV17 481 aaPredicted RBP12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 TRIM68Q6AZZ1 485 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 SCYL2Q6P3W7 929 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 ARCQ7LC44 396 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 DENND1CQ8IV53 801 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 MFSD6LQ8IWD5 586 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 SLC44A3Q8N4M1 653 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 FAM172AQ8WUF8 416 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 PLD4Q96BZ4 506 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 FCRL2Q96LA5 508 aaPredicted RBP12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 PPP1R9BQ96SB3 815 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 CNPY3Q9BT09 278 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 TRMT61BQ9BVS5 477 aaKnown RBP12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 LINC00597Q9H2U6 94 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 KCNF1Q9H3M0 494 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 PIGVQ9NUD9 493 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 THG1LQ9NWX6 298 aaKnown RBP12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 DUS2Q9NX74 493 aaKnown RBP12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 OBP2AQ9NY56 170 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 IGSF9Q9P2J2 1179 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 TLR6Q9Y2C9 796 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 WNT6Q9Y6F9 365 aa12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 DNMT3AQ9Y6K1 912 aaPredicted RBP12.47□□□□□ -0.41
HMGB1P8-201ENST00000558211 MYOFQ9NZM1 2061 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 A0A0U1RQJ8 604 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 E2F8A0AVK6 867 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 MYO1FO00160 1098 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 F9P00740 461 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 IGLV3-25P01717 112 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 APOEP02649 317 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 KLKB1P03952 638 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 RDXP35241 583 aaKnown RBP12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 SSR1P43307 286 aaKnown RBP12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 PTPN9P43378 593 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 IFNAR2P48551 515 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 VAV2P52735 878 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 INSM1Q01101 510 aaPredicted RBP12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 MESDQ14696 234 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 DAB2IPQ5VWQ8 1189 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 FAM131BQ86XD5 332 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 UNC45BQ8IWX7 931 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 BBS7Q8IWZ6 715 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 RHOT2Q8IXI1 618 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 GJD3Q8N144 294 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 TTC8Q8TAM2 541 aa12.46□□□□□ -0.41
HMGB1P8-201ENST00000558211 DEPDC1BQ8WUY9 529 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms