RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 HLA-EP13747 358 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 CHRNB2P17787 502 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 TACR2P21452 398 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 NOS2P35228 1153 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 COPAP53621 1224 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 SNX16P57768 344 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 POLR2FP61218 127 aaKnown RBP9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 LMAN2Q12907 356 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 STARD3Q14849 445 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 SYCP1Q15431 976 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 PTPRNQ16849 979 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 AASDHQ4L235 1098 aaPredicted RBP9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 FSCBQ5H9T9 825 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 FKBP15Q5T1M5 1219 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 OTUD1Q5VV17 481 aaPredicted RBP9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 RAP1GAP2Q684P5 730 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 SERPINA13PQ6UXR4 307 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 DGLUCYQ7Z3D6 616 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 CYP2U1Q7Z449 544 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 CHSY1Q86X52 802 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 ERICH1Q86X53 443 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 XYLT1Q86Y38 959 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 TMPRSS6Q8IU80 811 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 ZDHHC17Q8IUH5 632 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 MFN1Q8IWA4 741 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 LGI2Q8N0V4 545 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 AHI1Q8N157 1196 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 CARNMT1Q8N4J0 409 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 DEFB119Q8N690 84 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 C12orf50Q8NA57 414 aaPredicted RBP9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 SLC20A1Q8WUM9 679 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 PIGKQ92643 395 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 NT5C3BQ969T7 300 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 TTC17Q96AE7 1141 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 C18orf8Q96DM3 657 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 NPY6RQ99463 290 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 PRMT1Q99873 361 aaKnown RBP9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 PDCL3Q9H2J4 239 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 SYNCQ9H7C4 482 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 FAM204AQ9H8W3 233 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 NLRC4Q9NPP4 1024 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 FAM207AQ9NSI2 230 aaPredicted RBP9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 TMEM74BQ9NUR3 256 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 DDIT4Q9NX09 232 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 NOCTQ9UK39 431 aaKnown RBP9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 INTS6Q9UL03 887 aaKnown RBP9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 CYP8B1Q9UNU6 501 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 CEP83Q9Y592 693 aa9.09□□□□□ -0.95
SNRPA1-206ENST00000558059 SYNJ2BP-COX16A0A087WUM0 186 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 FAM170AA1A519 330 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 PATE3B3GLJ2 98 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 M0QYT0 321 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 TM4SF5O14894 197 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 SYNCRIPO60506 623 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 LUC7L3O95232 432 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 LSM8O95777 96 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ATP5BP06576 529 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 EPHX1P07099 455 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 TPM2P07951 284 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 SLC2A3P11169 496 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ATP1A3P13637 1013 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 POLR2EP19388 210 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 TFE3P19532 575 aaPredicted RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 CDK11BP21127 795 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ITPKAP23677 461 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 CCR1P32246 355 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 SOX5P35711 763 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 SCNN1AP37088 669 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 CSKP41240 450 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 MATKP42679 507 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 LIMK1P53667 647 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 RNASE9P60153 205 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 NOMO3P69849 1222 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 FOXK2Q01167 660 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 FMO1Q01740 532 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 RPL6Q02878 288 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ARID5AQ03989 594 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 CAMK2GQ13555 558 aaPredicted RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ANO6Q4KMQ2 910 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 FNDC3BQ53EP0 1204 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 C2CD6Q53TS8 623 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 STPG1Q5TH74 334 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 NAA35Q5VZE5 725 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 KIAA1324Q6UXG2 1013 aaKnown RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 SLC36A4Q6YBV0 504 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 MMS22LQ6ZRQ5 1243 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ARMCX6Q7L4S7 300 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ZNF677Q86XU0 584 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 SYT12Q8IV01 421 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 SLC41A1Q8IVJ1 513 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 AOPEPQ8N6M6 819 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ZNF366Q8N895 744 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ATP6V0D2Q8N8Y2 350 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ZNF557Q8N988 423 aaPredicted RBP9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 CPA5Q8WXQ8 436 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 SIPA1Q96FS4 1042 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 MYO19Q96H55 970 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ERGIC2Q96RQ1 377 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 PRDM16Q9HAZ2 1276 aa9.08□□□□□ -0.96
SNRPA1-206ENST00000558059 ITM2CQ9NQX7 267 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms