RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 LRRC31Q6UY01 552 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 NUDT18Q6ZVK8 323 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 TFAP2DQ7Z6R9 452 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 SLFN11Q7Z7L1 901 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 FAM72BQ86X60 149 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 CCAR2Q8N163 923 aaKnown RBP14.79□□□□□ -0.04
USP3-205ENST00000557884 PYROXD2Q8N2H3 581 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 CCDC33Q8N5R6 958 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 ALLCQ8N6M5 410 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 USP33Q8TEY7 942 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 SORCS1Q8WY21 1168 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 NTAN1Q96AB6 310 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 C1orf74Q96LT6 269 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 PEBP4Q96S96 227 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 CIPCQ9C0C6 399 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 OSGEPQ9NPF4 335 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 MPP6Q9NZW5 540 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 UVRAGQ9P2Y5 699 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 OR12D3Q9UGF7 316 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 IP6K2Q9UHH9 426 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 GGA2Q9UJY4 613 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 HCN2Q9UL51 889 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 FZD10Q9ULW2 581 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 TFR2Q9UP52 801 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 PCDHA13Q9Y5I0 950 aa14.79□□□□□ -0.04
USP3-205ENST00000557884 EPN1Q9Y6I3 576 aaPredicted RBP14.79□□□□□ -0.04
USP3-205ENST00000557884 A0A0A0MRY4 1105 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 A0A1B0GVM2 712 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 TCAF2A6NFQ2 919 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 TMEM110-MUSTN1A8MSY1 372 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 MYO1FO00160 1098 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 LAMTOR5O43504 91 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 GALR2O43603 387 aaPredicted RBP14.78□□□□□ -0.04
USP3-205ENST00000557884 PRPSAP2O60256 369 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 LRCH4O75427 683 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 NDUFA10O95299 355 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 KLF8O95600 359 aaPredicted RBP14.78□□□□□ -0.04
USP3-205ENST00000557884 PABPC1P11940 636 aaKnown RBP14.78□□□□□ -0.04
USP3-205ENST00000557884 TCF4P15884 667 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 WASP42768 502 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 SCAPQ12770 1279 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 ARTNQ5T4W7 220 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 TMEM215Q68D42 235 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 RWDD4Q6NW29 188 aaKnown RBP14.78□□□□□ -0.04
USP3-205ENST00000557884 CHST9Q7L1S5 443 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 CPNE8Q86YQ8 564 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 TMEM139Q8IV31 216 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 C1orf210Q8IVY1 113 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 SPEM1Q8N4L4 309 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 ZNF513Q8N8E2 541 aaPredicted RBP14.78□□□□□ -0.04
USP3-205ENST00000557884 ACRBPQ8NEB7 543 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 FIBINQ8TAL6 211 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 SLC35G2Q8TBE7 412 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 OSBPL2Q9H1P3 480 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 RAPGEFL1Q9UHV5 662 aa14.78□□□□□ -0.04
USP3-205ENST00000557884 MYOFQ9NZM1 2061 aa14.77□□□□□ -0.04
USP3-205ENST00000557884 IGLV3-10A0A075B6K4 115 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 DRGXA6NNA5 263 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 EIF3CLB5ME19 914 aaKnown RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 CLDN11O75508 207 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 LRIG2O94898 1065 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 LCA5LO95447 670 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 CHRM1P11229 460 aaPredicted RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 HOXC13P31276 330 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 CSKP41240 450 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 SSR1P43307 286 aaKnown RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 KIR2DL1P43626 348 aaPredicted RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 CDH4P55283 916 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 GSDMDP57764 484 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 MRPS21P82921 87 aaKnown RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 ZNF177Q13360 481 aaPredicted RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 PIGHQ14442 188 aaPredicted RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 CA9Q16790 459 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 FUT11Q495W5 492 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 C5orf22Q49AR2 442 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 TSSK4Q6SA08 328 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.77□□□□□ -0.058e-6■□□□□ 9.8
USP3-205ENST00000557884 TXNDC5Q8NBS9 432 aaKnown RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 PRSS33Q8NF86 280 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 CCDC26Q8TAB7 109 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 WFIKKN2Q8TEU8 576 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 CYB5D2Q8WUJ1 264 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 RFFLQ8WZ73 363 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 ERLEC1Q96DZ1 483 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 LMLNQ96KR4 655 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 ACOX2Q99424 681 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 EIF3CQ99613 913 aaKnown RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 SNRNP25Q9BV90 132 aaKnown RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 DHX35Q9H5Z1 703 aaKnown RBP14.77□□□□□ -0.05
USP3-205ENST00000557884 ZWILCHQ9H900 591 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 ELOVL2Q9NXB9 296 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 CACNA2D2Q9NY47 1150 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 INTUQ9ULD6 942 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 USP18Q9UMW8 372 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 AP4E1Q9UPM8 1137 aa14.77□□□□□ -0.05
USP3-205ENST00000557884 CREB3O43889 395 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 ATG13O75143 517 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 PROSCO94903 275 aa14.76□□□□□ -0.05
USP3-205ENST00000557884 IPO7O95373 1038 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms