RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 VANGL2Q9ULK5 521 aa12.65□□□□□ -0.38
RCCD1-209ENST00000557750 PCDHGA2Q9Y5H1 932 aa12.65□□□□□ -0.38
RCCD1-209ENST00000557750 HS3ST4Q9Y661 456 aa12.65□□□□□ -0.38
RCCD1-209ENST00000557750 KMT2BQ9UMN6 2715 aaPredicted RBP12.65□□□□□ -0.38
RCCD1-209ENST00000557750 HELZP42694 1942 aaKnown RBP12.65□□□□□ -0.38
RCCD1-209ENST00000557750 RCCD1A6NED2 376 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 PRPSAP2O60256 369 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 LRCH4O75427 683 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 MIPP30301 263 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 SGSHP51688 502 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 MLLT6P55198 1093 aaPredicted RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 NAP1L1P55209 391 aaKnown RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 AUHQ13825 339 aaKnown RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 MESDQ14696 234 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 EFHC2Q5JST6 749 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 FYB2Q5VWT5 728 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 C1orf228Q6PIY5 440 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 TXNDC11Q6PKC3 985 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 ZNF852Q6ZMS4 543 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 CFAP52Q8N1V2 620 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 ARFGAP1Q8N6T3 406 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 NIPA2Q8N8Q9 360 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 FAM3CQ92520 227 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 NTAN1Q96AB6 310 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 PRICKLE1Q96MT3 831 aaPredicted RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 CNTNAP3BQ96NU0 1288 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 RPRD1AQ96P16 312 aaPredicted RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 HAPLN3Q96S86 360 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 PRMT1Q99873 361 aaKnown RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 NCAPGQ9BPX3 1015 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 CNTNAP3Q9BZ76 1288 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 STIM2Q9P246 746 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 LCMT1Q9UIC8 334 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 SNX10Q9Y5X0 201 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 MAN2B1O00754 1011 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 TBL1XO60907 577 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 SRGAP2O75044 1071 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 MTA2O94776 668 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 PROSCO94903 275 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 PENKP01210 267 aaPredicted RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 TARSP26639 723 aaKnown RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 PCK1P35558 622 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 MAGEA9P43362 315 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 RPS24P62847 133 aaKnown RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 KIF5AQ12840 1032 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 GAB4Q2WGN9 574 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 RABGAP1LQ5R372 815 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 ACBD5Q5T8D3 534 aaPredicted RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 NAIF1Q69YI7 327 aaPredicted RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 FBXL22Q6P050 247 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 TSSK4Q6SA08 328 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 LRRC31Q6UY01 552 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 C12orf40Q86WS4 652 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 HJURPQ8NCD3 748 aaPredicted RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 ZBTB44Q8NCP5 570 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 NELL1Q92832 810 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 EXOC4Q96A65 974 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 CLDN23Q96B33 292 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 CHFRQ96EP1 664 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 MYEOVQ96EZ4 313 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 P2RY11Q96G91 374 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 C1orf74Q96LT6 269 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 DNAJC17Q9NVM6 304 aaKnown RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 ZSCAN32Q9NX65 697 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 USP18Q9UMW8 372 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 NDRG2Q9UN36 371 aaKnown RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 SMG5Q9UPR3 1016 aaKnown RBP12.64□□□□□ -0.39
RCCD1-209ENST00000557750 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
RCCD1-209ENST00000557750 A0A0A6YYK5 440 aaPredicted RBP12.63□□□□□ -0.39
RCCD1-209ENST00000557750 GFRA2O00451 464 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 BUB1O43683 1085 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 CACNG3O60359 315 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 KRT37O76014 449 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 HOXD9P28356 352 aaPredicted RBP12.63□□□□□ -0.39
RCCD1-209ENST00000557750 OPRD1P41143 372 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 ARHGAP25P42331 645 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 SLC6A11P48066 632 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 AIF1P55008 147 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 SCAPQ12770 1279 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 PON2Q15165 354 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 TCEAL1Q15170 157 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 C14orf80Q86SX3 495 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 CD101Q93033 1021 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 ZNF830Q96NB3 372 aaPredicted RBP12.63□□□□□ -0.39
RCCD1-209ENST00000557750 PEBP4Q96S96 227 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 P2RY13Q9BPV8 354 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 IRX2Q9BZI1 471 aaPredicted RBP12.63□□□□□ -0.39
RCCD1-209ENST00000557750 LACRTQ9GZZ8 138 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 EPC1Q9H2F5 836 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 ZWILCHQ9H900 591 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 DEC1Q9P2X7 70 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 OR12D3Q9UGF7 316 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 FZD10Q9ULW2 581 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 MRPS17Q9Y2R5 130 aaKnown RBP12.63□□□□□ -0.39
RCCD1-209ENST00000557750 DUSP10Q9Y6W6 482 aa12.63□□□□□ -0.39
RCCD1-209ENST00000557750 SHISA7A6NL88 538 aa12.62□□□□□ -0.39
RCCD1-209ENST00000557750 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.62□□□□□ -0.39
RCCD1-209ENST00000557750 PJA2O43164 708 aa12.62□□□□□ -0.39
RCCD1-209ENST00000557750 LILRB5O75023 590 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms