RNA–Protein interactions for RNA: ENST00000557680.1

PNN-206, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3

Gene PNN, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-206ENST00000557680 GDAQ9Y2T3 454 aa4.79□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3DA0A087WVF3 549 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3IA0A087WXS9 549 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3EA0A087X179 549 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3KA0A087X1G2 549 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3BA6NDS4 549 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3FA6NER0 549 aaPredicted RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 C17orf100A8MU93 164 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3LB9A6J9 549 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 SEPT4O43236 478 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 PRAMEF2O60811 474 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TULP3O75386 442 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 PMPCBO75439 489 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 WEE2P0C1S8 567 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3HP0C7X1 549 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 LAMP2P13473 410 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 ALOX12P18054 663 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 CD72P21854 359 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 CLNS1AP54105 237 aaKnown RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 TERF1P54274 439 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 ARF3P61204 181 aaPredicted RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 IFI35P80217 286 aaPredicted RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 ARF1P84077 181 aaKnown RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 COL10A1Q03692 680 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 CDK18Q07002 472 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 CUL4AQ13619 759 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 THOC5Q13769 683 aaKnown RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 BECN1Q14457 450 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 SPECC1Q5M775 1068 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3GQ6DHY5 549 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3CQ6IPX1 549 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 MRGPREQ86SM8 312 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 RAB11FIP4Q86YS3 637 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 TBC1D3Q8IZP1 549 aaPredicted RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.78□□□□□ -1.64
PNN-206ENST00000557680 NFKBIDQ8NI38 313 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 MYCBPAPQ8TBZ2 947 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 SLC25A43Q8WUT9 341 aaPredicted RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 HAS1Q92839 578 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 SH3KBP1Q96B97 665 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 EIF3CQ99613 913 aaKnown RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.78□□□□□ -1.64
PNN-206ENST00000557680 DPCDQ9BVM2 203 aaPredicted RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 CCDC68Q9H2F9 335 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 PDE11AQ9HCR9 933 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 ZCCHC17Q9NP64 241 aaKnown RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 SLC22A11Q9NSA0 550 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 INTS13Q9NVM9 706 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 VPS4AQ9UN37 437 aa4.78□□□□□ -1.64
PNN-206ENST00000557680 UBE2J1Q9Y385 318 aaPredicted RBP4.78□□□□□ -1.64
PNN-206ENST00000557680 ADGRA2Q96PE1 1338 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 A0A1W2PQM1 296 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 hCG_1807616A0A1W2PRN6 198 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 NPIPB13A6NJU9 1138 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 NPIPB5A8MRT5 1133 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 A8MVJ9 347 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 GOLGA6L6A8MZA4 724 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 NPIPB4C9JG80 1138 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 DIRC3C9JPN6 131 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 AP4M1O00189 453 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 SYN3O14994 580 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 HNRNPRO43390 633 aaKnown RBP4.77□□□□□ -1.65
PNN-206ENST00000557680 ANP32CO43423 234 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 NDUFA10O95299 355 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 SLC3A2P08195 630 aaKnown RBP4.77□□□□□ -1.65
PNN-206ENST00000557680 ACADMP11310 421 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 MYCLP12524 364 aaPredicted RBP4.77□□□□□ -1.65
PNN-206ENST00000557680 PRKCHP24723 683 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 TM4SF1P30408 202 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 GKP32189 559 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 CXCR5P32302 372 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 GRK5P34947 590 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 MTHFSP49914 203 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 MVDP53602 400 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 CDH15P55291 814 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 PSMC6P62333 389 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 ZBED6P86452 979 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 PSG6Q00889 435 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 CREB5Q02930 508 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 MPP3Q13368 585 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 GAB1Q13480 694 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 BEAN1Q3B7T3 259 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 SLC9B1Q4ZJI4 515 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 ZNF766Q5HY98 468 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 RABL3Q5HYI8 236 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 MON1AQ86VX9 555 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 TTC39CQ8N584 583 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 PLD5Q8N7P1 536 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 BEND2Q8NDZ0 799 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 EYA3Q99504 573 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 NPAS1Q99742 590 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 MXD3Q9BW11 206 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 HDHD5Q9BXW7 423 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 INTS2Q9H0H0 1204 aaKnown RBP4.77□□□□□ -1.65
PNN-206ENST00000557680 GLOD4Q9HC38 313 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 GALNT9Q9HCQ5 603 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 AKIP1Q9NQ31 210 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 TMLHEQ9NVH6 421 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 THAP1Q9NVV9 213 aa4.77□□□□□ -1.65
PNN-206ENST00000557680 NFKBIL1Q9UBC1 381 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms