RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CHPFQ8IZ52 775 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 MCOLN2Q8IZK6 566 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.92□□□□□ -0.34
SLIRP-211ENST00000557623 TTC13Q8NBP0 860 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 ANKK1Q8NFD2 765 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 FIBINQ8TAL6 211 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 RXFP2Q8WXD0 754 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 CFAP57Q96MR6 1250 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 PRICKLE1Q96MT3 831 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-211ENST00000557623 PRMT1Q99873 361 aaKnown RBP12.92□□□□□ -0.34
SLIRP-211ENST00000557623 TKTL2Q9H0I9 626 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 ELOVL2Q9NXB9 296 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 GGA2Q9UJY4 613 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 CLEC4EQ9ULY5 219 aa12.92□□□□□ -0.34
SLIRP-211ENST00000557623 ANTXRLA6NF34 631 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 C2CD4BA6NLJ0 364 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 H0Y626 953 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 AXIN1O15169 862 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-211ENST00000557623 ADAM23O75077 832 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 RTN2O75298 545 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 PAGE1O75459 146 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 ENDOD1O94919 500 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 LUC7L3O95232 432 aaKnown RBP12.91□□□□□ -0.34
SLIRP-211ENST00000557623 LMNAP02545 664 aaKnown RBP12.91□□□□□ -0.34
SLIRP-211ENST00000557623 GYPCP04921 128 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 SERPING1P05155 500 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 TPM1P09493 284 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 PABPC1P11940 636 aaKnown RBP12.91□□□□□ -0.34
SLIRP-211ENST00000557623 SKILP12757 684 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 HOXB2P14652 356 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 TFE3P19532 575 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-211ENST00000557623 GPD1P21695 349 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 HLA-FP30511 346 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 PTPN9P43378 593 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 MRE11P49959 708 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 OXCT1P55809 520 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 DMWDQ09019 674 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 ARL13BQ3SXY8 428 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 E4F1Q66K89 784 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-211ENST00000557623 TRNP1Q6NT89 227 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 CHST9Q7L1S5 443 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 STRADAQ7RTN6 431 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 KIAA0907Q7Z7F0 614 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-211ENST00000557623 PHLDB2Q86SQ0 1253 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 CFAP52Q8N1V2 620 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 CARNMT1Q8N4J0 409 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 EMC1Q8N766 993 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 JOSD2Q8TAC2 188 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 CIPCQ9C0C6 399 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 ABCB8Q9NUT2 735 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 POLR3BQ9NW08 1133 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-211ENST00000557623 CALCOCO1Q9P1Z2 691 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 KIAA1522Q9P206 1035 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-211ENST00000557623 THAP10Q9P2Z0 257 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-211ENST00000557623 HS3ST4Q9Y661 456 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 PLXND1Q9Y4D7 1925 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 CKAP5Q14008 2032 aa12.91□□□□□ -0.34
SLIRP-211ENST00000557623 CACNA1HO95180 2353 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 A0A1B0GVM2 712 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 TCRBV5S1A1TA0A578 114 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 PRR23AA6NEV1 266 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 TCAF2A6NFQ2 919 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 GFRA3O60609 400 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 MOCS3O95396 460 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 ADCY5O95622 1261 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 FTLP02792 175 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-211ENST00000557623 ATP5BP06576 529 aaKnown RBP12.9□□□□□ -0.34
SLIRP-211ENST00000557623 POLR2EP19388 210 aaKnown RBP12.9□□□□□ -0.34
SLIRP-211ENST00000557623 CASP14P31944 242 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 RFC1P35251 1148 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-211ENST00000557623 ATP11AP98196 1134 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 SLC12A1Q13621 1099 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 AUHQ13825 339 aaKnown RBP12.9□□□□□ -0.34
SLIRP-211ENST00000557623 CDO1Q16878 200 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 CCDC14Q49A88 953 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 HGSNATQ68CP4 663 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 FBXL22Q6P050 247 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 DCUN1D2Q6PH85 259 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 WDR59Q6PJI9 974 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 LRRC31Q6UY01 552 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 RASSF3Q86WH2 238 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 MYEOVQ96EZ4 313 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 C1orf74Q96LT6 269 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 RPRD1AQ96P16 312 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-211ENST00000557623 HAPLN3Q96S86 360 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 PPP1R9BQ96SB3 815 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 GABRG3Q99928 467 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 SIK2Q9H0K1 926 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 EPC1Q9H2F5 836 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 ZDHHC4Q9NPG8 344 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 PARVAQ9NVD7 372 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 TAS2R14Q9NYV8 317 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 HCN2Q9UL51 889 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 RAB23Q9ULC3 237 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 VANGL2Q9ULK5 521 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 PLA2G4CQ9UP65 541 aa12.9□□□□□ -0.34
SLIRP-211ENST00000557623 STON1Q9Y6Q2 735 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms