RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 TPM1P09493 284 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 CHRNB2P17787 502 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 IL12RB1P42701 662 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 SGSHP51688 502 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 PITX1P78337 314 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 ARHGAP8P85298 464 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 LMAN2Q12907 356 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 EIF4EBP2Q13542 120 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 AUHQ13825 339 aaKnown RBP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 NR1I3Q14994 352 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 PLK5Q496M5 336 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 C2CD6Q53TS8 623 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 FIGNQ5HY92 759 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 SPDYCQ5MJ68 293 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 DCUN1D2Q6PH85 259 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 DCLK2Q8N568 766 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 C12orf50Q8NA57 414 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 C3orf20Q8ND61 904 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 PRCCQ92733 491 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 NT5C3BQ969T7 300 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 CFAP57Q96MR6 1250 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 PRICKLE1Q96MT3 831 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 NAP1L5Q96NT1 182 aaPredicted RBP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 TBCBQ99426 244 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 PRDM16Q9HAZ2 1276 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 PIGVQ9NUD9 493 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 ARHGEF38Q9NXL2 777 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 XPO7Q9UIA9 1087 aaKnown RBP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 VANGL2Q9ULK5 521 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 RAD54BQ9Y620 910 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 BZW2Q9Y6E2 419 aaKnown RBP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 GPR179Q6PRD1 2367 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 A0A1W2PQF6 199 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 FAM170AA1A519 330 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 GOLGA6L3A6NEY3 463 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 EPN2O95208 641 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 GABRG2P18507 467 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 CD70P32970 193 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 FLT3P36888 993 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 P2RY2P41231 377 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 DHPSP49366 369 aaPredicted RBP14.25□□□□□ -0.13
VPS33B-206ENST00000557358 CDH4P55283 916 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 GSCP56915 257 aaPredicted RBP14.25□□□□□ -0.13
VPS33B-206ENST00000557358 ATP11AP98196 1134 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 CREB5Q02930 508 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 SPEM2Q0P670 501 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 TDRD12Q587J7 1177 aaKnown RBP14.25□□□□□ -0.13
VPS33B-206ENST00000557358 RNF43Q68DV7 783 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 ACAD10Q6JQN1 1059 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 FBXL22Q6P050 247 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 KIAA0907Q7Z7F0 614 aaPredicted RBP14.25□□□□□ -0.13
VPS33B-206ENST00000557358 ADIPOR2Q86V24 386 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 CCAR2Q8N163 923 aaKnown RBP14.25□□□□□ -0.13
VPS33B-206ENST00000557358 CYB5D2Q8WUJ1 264 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 RXFP2Q8WXD0 754 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 SORCS1Q8WY21 1168 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 TRIM11Q96F44 468 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 SIPA1Q96FS4 1042 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 VCPIP1Q96JH7 1222 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 C1orf74Q96LT6 269 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 HAPLN3Q96S86 360 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 AIPL1Q9NZN9 384 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 CALCOCO1Q9P1Z2 691 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 TMEM59LQ9UK28 342 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 INVSQ9Y283 1065 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 HS3ST4Q9Y661 456 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 EML5Q05BV3 1969 aa14.25□□□□□ -0.13
VPS33B-206ENST00000557358 ABCA7Q8IZY2 2146 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 GVINP1Q7Z2Y8 2422 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 A0A1W2PQJ5 194 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 ANTXRLA6NF34 631 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 SIGLEC16A6NMB1 481 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 WASH3PC4AMC7 463 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 DCLK1O15075 740 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 SRPRAP08240 638 aaKnown RBP14.24□□□□□ -0.13
VPS33B-206ENST00000557358 NDUFV2P19404 249 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 GPD1P21695 349 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 OXTRP30559 389 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 CSKP41240 450 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 PTPN9P43378 593 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 ECT2LQ008S8 904 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 RPL6Q02878 288 aaKnown RBP14.24□□□□□ -0.13
VPS33B-206ENST00000557358 ENPP2Q13822 863 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 GSE1Q14687 1217 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 CSRP2Q16527 193 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 CDO1Q16878 200 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 TSR1Q2NL82 804 aaKnown RBP14.24□□□□□ -0.13
VPS33B-206ENST00000557358 FUT11Q495W5 492 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 TTC31Q49AM3 519 aaPredicted RBP14.24□□□□□ -0.13
VPS33B-206ENST00000557358 PITRM1Q5JRX3 1037 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 PMS2CLQ68D20 193 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 KIAA1211LQ6NV74 962 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 STRADAQ7RTN6 431 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 CYP2U1Q7Z449 544 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 IRF2BP2Q7Z5L9 587 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 PHLDB2Q86SQ0 1253 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 TMPRSS6Q8IU80 811 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 KDM1BQ8NB78 822 aa14.24□□□□□ -0.13
VPS33B-206ENST00000557358 OR2T3Q8NH03 318 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms