RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 ZNF513Q8N8E2 541 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-228ENST00000557302 IL17RCQ8NAC3 791 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 FIBINQ8TAL6 211 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 WFDC5Q8TCV5 224 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 WFIKKN2Q8TEU8 576 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 FNIP1Q8TF40 1166 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 UCMAQ8WVF2 138 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 IGSF8Q969P0 613 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 NTAN1Q96AB6 310 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 C2orf42Q9NWW7 574 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 GGA2Q9UJY4 613 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 SLC8A2Q9UPR5 921 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 SNX10Q9Y5X0 201 aa14.03□□□□□ -0.16
SHMT2-228ENST00000557302 A0A1B0GVM2 712 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 TCAF2A6NFQ2 919 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 H0Y626 953 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 CYP1A2P05177 515 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 SP9P0CG40 484 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 CHRM1P11229 460 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-228ENST00000557302 PABPC1P11940 636 aaKnown RBP14.02□□□□□ -0.17
SHMT2-228ENST00000557302 CDC25BP30305 580 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 DMC1Q14565 340 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 E2F5Q15329 346 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 ZNF528Q3MIS6 628 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 C5orf22Q49AR2 442 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 EOGTQ5NDL2 527 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 EGFLAMQ63HQ2 1017 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 SCYL2Q6P3W7 929 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 TSSK4Q6SA08 328 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 CHST9Q7L1S5 443 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 SYT13Q7L8C5 426 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 CIR1Q86X95 450 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-228ENST00000557302 CCDC185Q8N715 623 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 TXNDC5Q8NBS9 432 aaKnown RBP14.02□□□□□ -0.17
SHMT2-228ENST00000557302 CTNNBL1Q8WYA6 563 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-228ENST00000557302 NUP85Q9BW27 656 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 TRIM7Q9C029 511 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 CIPCQ9C0C6 399 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 ZDHHC4Q9NPG8 344 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 SPTLC3Q9NUV7 552 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 ELOVL2Q9NXB9 296 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 MMP17Q9ULZ9 603 aa14.02□□□□□ -0.17
SHMT2-228ENST00000557302 VPS13AQ96RL7 3174 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 E9PAM4 449 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 TIMM44O43615 452 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 SRGAP2O75044 1071 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 CLDN11O75508 207 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 RNF8O76064 485 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 H2AFZP0C0S5 128 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 CD70P32970 193 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 IRAK1P51617 712 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 CDH4P55283 916 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 ZNF252P-AS1Q0IIN9 211 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 SCAPQ12770 1279 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 LMAN2Q12907 356 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 EFHC2Q5JST6 749 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 SDE2Q6IQ49 451 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 H2AFVQ71UI9 128 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 KIAA0907Q7Z7F0 614 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-228ENST00000557302 SLFN11Q7Z7L1 901 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 ZNF683Q8IZ20 524 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 CHPFQ8IZ52 775 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 ATOH1Q92858 354 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-228ENST00000557302 ARHGEF26Q96DR7 871 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 PANX2Q96RD6 677 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 PACSIN1Q9BY11 444 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 OSBPL2Q9H1P3 480 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 POLR3BQ9NW08 1133 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-228ENST00000557302 KIAA1522Q9P206 1035 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-228ENST00000557302 HCN2Q9UL51 889 aa14.01□□□□□ -0.17
SHMT2-228ENST00000557302 ATG2BQ96BY7 2078 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 IGLV3-10A0A075B6K4 115 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14□□□□□ -0.17
SHMT2-228ENST00000557302 DRGXA6NNA5 263 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 K7ESF4 209 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 SGK1O00141 431 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 NPC1O15118 1278 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 MOCS3O95396 460 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 TMEM253P0C7T8 217 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 TDGF1P13385 188 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 HNRNPLP14866 589 aaKnown RBP eCLIP14□□□□□ -0.17
SHMT2-228ENST00000557302 POLR2EP19388 210 aaKnown RBP14□□□□□ -0.17
SHMT2-228ENST00000557302 NTSR1P30989 418 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 NRLP54845 237 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 AIF1P55008 147 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 OXCT1P55809 520 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 NRG1Q02297 640 aaPredicted RBP14□□□□□ -0.17
SHMT2-228ENST00000557302 ZNF177Q13360 481 aaPredicted RBP14□□□□□ -0.17
SHMT2-228ENST00000557302 FUT11Q495W5 492 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 FSCBQ5H9T9 825 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 TMEM215Q68D42 235 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 MBLAC2Q68D91 279 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14□□□□□ -0.17
SHMT2-228ENST00000557302 ADIPOR2Q86V24 386 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 TSTD1Q8NFU3 115 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 ZNF564Q8TBZ8 553 aaPredicted RBP14□□□□□ -0.17
SHMT2-228ENST00000557302 LMLNQ96KR4 655 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 ACOX2Q99424 681 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 NCAPGQ9BPX3 1015 aa14□□□□□ -0.17
SHMT2-228ENST00000557302 FAM126AQ9BYI3 521 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms