RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ASPAP45381 313 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 FKBP3Q00688 224 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 SATB1Q01826 763 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 INCA1Q0VD86 236 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 PIN1Q13526 163 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 SCARA5Q6ZMJ2 495 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 PHACTR4Q8IZ21 702 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 ADGRG2Q8IZP9 1017 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 GPR161Q8N6U8 529 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 CCDC26Q8TAB7 109 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 TAS1R2Q8TE23 839 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 SECISBP2LQ93073 1101 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 SMARCE1Q969G3 411 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 PPP1R14AQ96A00 147 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 SMAD5Q99717 465 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 HNRNPABQ99729 332 aaKnown RBP10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 TSG101Q99816 390 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 P2RY13Q9BPV8 354 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 LGR4Q9BXB1 951 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 TRIM8Q9BZR9 551 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 FBXO44Q9H4M3 255 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 TMEM30AQ9NV96 361 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 CHORDC1Q9UHD1 332 aaPredicted RBP10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 PCDHA5Q9Y5H7 936 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 DMDP11532 3685 aa10.36□□□□□ -0.75
HNRNPC-228ENST00000557033 F5P12259 2224 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 LINC01387J3KSC0 135 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 K7ESF4 209 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 AXIN1O15169 862 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 CBFA2T2O43439 604 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 RGS9O75916 674 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 ZDHHC11BP0C7U3 371 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 EPB41P11171 864 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 BMP4P12644 408 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 PPP1R2P41236 205 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 TUBP50607 506 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 ZXDBP98169 803 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 SEPT7Q16181 437 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 HECTD3Q5T447 861 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 SYCP2LQ5T4T6 812 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 SLC6A19Q695T7 634 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 ANKRD40Q6AI12 368 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 SPOPLQ6IQ16 392 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 FSTL4Q6MZW2 842 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 FOXR1Q6PIV2 292 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 FGD2Q7Z6J4 655 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 LONP2Q86WA8 852 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 SMYD4Q8IYR2 804 aaPredicted RBP10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 SLC2A14Q8TDB8 520 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 CD101Q93033 1021 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 FBXO32Q969P5 355 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 CHFRQ96EP1 664 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 CYFIP2Q96F07 1278 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 YIPF4Q9BSR8 244 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 LINC00597Q9H2U6 94 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 APOBEC3GQ9HC16 384 aaKnown RBP10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 AASDHPPTQ9NRN7 309 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 RAB20Q9NX57 234 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 PLA2G2EQ9NZK7 142 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 TBC1D14Q9P2M4 693 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 NDOR1Q9UHB4 597 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 CPQQ9Y646 472 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 WNT6Q9Y6F9 365 aa10.35□□□□□ -0.75
HNRNPC-228ENST00000557033 SLC16A3O15427 465 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 BEST1O76090 585 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 FAM200BP0CF97 657 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 MBL2P11226 248 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 SLC5A3P53794 718 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 GABREP78334 506 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 LRRC63Q05C16 580 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 STIM1Q13586 685 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 PPM1JQ5JR12 505 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 Q6ZS52 159 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 SPATS2Q86XZ4 545 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 MRPL41Q8IXM3 137 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 ZC3H3Q8IXZ2 948 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 CAMKK1Q8N5S9 505 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 C12orf29Q8N999 325 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 BVESQ8NE79 360 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 FBXL13Q8NEE6 735 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 ZMIZ2Q8NF64 920 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 SCAMP5Q8TAC9 235 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 OTUB2Q96DC9 234 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 DHTKD1Q96HY7 919 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 MRGPRX3Q96LB0 322 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 CCDC74BQ96LY2 380 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 SMOQ99835 787 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 UBXN6Q9BZV1 441 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 MMRN2Q9H8L6 949 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 FBRSL1Q9HCM7 1045 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 PNPLA8Q9NP80 782 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 TLR8Q9NR97 1041 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 NCDNQ9UBB6 729 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 GDF2Q9UK05 429 aaPredicted RBP10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 RAB23Q9ULC3 237 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 SPEF1Q9Y4P9 236 aa10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 HELZP42694 1942 aaKnown RBP10.34□□□□□ -0.75
HNRNPC-228ENST00000557033 PSMA7O14818 248 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms