RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ANKRD20A4Q4UJ75 823 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 PPM1LQ5SGD2 360 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 UGT2A3Q6UWM9 527 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 ARHGAP22Q7Z5H3 698 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 RNF148Q8N7C7 305 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 B4GALNT2Q8NHY0 566 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 JADE3Q92613 823 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 EZH1Q92800 747 aaPredicted RBP11.69□□□□□ -0.54
SRP54-213ENST00000556994 SPATA33Q96N06 139 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 FDXACB1Q9BRP7 624 aaPredicted RBP11.69□□□□□ -0.54
SRP54-213ENST00000556994 WDR55Q9H6Y2 383 aaPredicted RBP11.69□□□□□ -0.54
SRP54-213ENST00000556994 CAB39LQ9H9S4 337 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 SNX15Q9NRS6 342 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 ARHGAP26Q9UNA1 814 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 SNX9Q9Y5X1 595 aa11.69□□□□□ -0.54
SRP54-213ENST00000556994 BPTFQ12830 3046 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 SYNJ2BP-COX16A0A087WUM0 186 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 A0A0A0MRY4 1105 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 C15orf38-AP3S2A0A0A6YYH1 394 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 DGKIO75912 1065 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 HSPA4LO95757 839 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 CCR10P46092 362 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 DEUP1Q05D60 604 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 INCA1Q0VD86 236 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 LSAMPQ13449 338 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 GK3PQ14409 553 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 GRM2Q14416 872 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 SOWAHAQ2M3V2 549 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.68□□□□□ -0.54
SRP54-213ENST00000556994 ARMC3Q5W041 872 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 C4orf22Q6V702 233 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 TMC7Q7Z402 723 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 ARPINQ7Z6K5 226 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 SPATA24Q86W54 205 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 FAM131BQ86XD5 332 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 TP53INP2Q8IXH6 220 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 NME8Q8N427 588 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 DCLK2Q8N568 766 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 CCNYQ8ND76 341 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 CHST13Q8NET6 341 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 ADAM32Q8TC27 787 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 NDRG1Q92597 394 aaKnown RBP11.68□□□□□ -0.54
SRP54-213ENST00000556994 SPATA13Q96N96 652 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 FCRL3Q96P31 734 aaPredicted RBP11.68□□□□□ -0.54
SRP54-213ENST00000556994 HAPLN3Q96S86 360 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 AGAP2Q99490 1192 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 PDZD7Q9H5P4 517 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 GGA3Q9NZ52 723 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 COX16Q9P0S2 106 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 MORF4L1Q9UBU8 362 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 ZNF112Q9UJU3 913 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 DTNAQ9Y4J8 743 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 RPS6KL1Q9Y6S9 549 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 COMMD3-BMI1R4GMX3 469 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 DOCK1Q14185 1865 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 MYOCOSA0A1B0GUC4 107 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 AMHP03971 560 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 VTNP04004 478 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 PGAM1P18669 254 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 HARS2P49590 506 aaKnown RBP11.68□□□□□ -0.54
SRP54-213ENST00000556994 GMPSP49915 693 aaPredicted RBP11.68□□□□□ -0.54
SRP54-213ENST00000556994 NUDT2P50583 147 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 ZNF280AP59817 542 aaPredicted RBP11.68□□□□□ -0.54
SRP54-213ENST00000556994 LRRC8BQ6P9F7 803 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 EPGNQ6UW88 154 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 CYS1Q717R9 158 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 TMEM110Q86TL2 294 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 SLC35F5Q8WV83 523 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 AGAP3Q96P47 875 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 CCDC28BQ9BUN5 200 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 SLC4A5Q9BY07 1137 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 DPEP3Q9H4B8 488 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 VRTNQ9H8Y1 702 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 UBAP1Q9NZ09 502 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 SSX2IPQ9Y2D8 614 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 HES2Q9Y543 173 aa11.68□□□□□ -0.54
SRP54-213ENST00000556994 RNF103O00237 685 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 CFLARO15519 480 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 GAS2O43903 313 aaKnown RBP11.67□□□□□ -0.54
SRP54-213ENST00000556994 MFSD11O43934 449 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 LTFP02788 710 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 ALOX15P16050 662 aaPredicted RBP11.67□□□□□ -0.54
SRP54-213ENST00000556994 ARF4P18085 180 aaPredicted RBP11.67□□□□□ -0.54
SRP54-213ENST00000556994 MX2P20592 715 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 EDNRBP24530 442 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 ADORA2BP29275 332 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 PMLP29590 882 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 FDFT1P37268 417 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 NR2C2P49116 596 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 MRPS22P82650 360 aaKnown RBP11.67□□□□□ -0.54
SRP54-213ENST00000556994 RBP5P82980 135 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 DBN1Q16643 649 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 PKDCCQ504Y2 493 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 OPTNQ96CV9 577 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 KIF12Q96FN5 646 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 P2RY11Q96G91 374 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 DCUN1D1Q96GG9 259 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 MPP4Q96JB8 637 aa11.67□□□□□ -0.54
SRP54-213ENST00000556994 DNAJC1Q96KC8 554 aaKnown RBP11.67□□□□□ -0.54
SRP54-213ENST00000556994 CDH19Q9H159 772 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms