RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 CAPSQ13938 189 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 BRD3Q15059 726 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 PCBP1Q15365 356 aaKnown RBP eCLIP4.74□□□□□ -1.65
SRP54-212ENST00000556992 RPS6KA1Q15418 735 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 ELF2Q15723 593 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 DDR2Q16832 855 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 SGSM1Q2NKQ1 1148 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 ZACNQ401N2 412 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 CCDC181Q5TID7 509 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 CDCA2Q69YH5 1023 aaPredicted RBP4.74□□□□□ -1.65
SRP54-212ENST00000556992 FSTL4Q6MZW2 842 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 RGMBQ6NW40 437 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 TMCO3Q6UWJ1 677 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 C15orf39Q6ZRI6 1047 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 MTDHQ86UE4 582 aaKnown RBP4.74□□□□□ -1.65
SRP54-212ENST00000556992 ZNF677Q86XU0 584 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 RHPN2Q8IUC4 686 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 RHOT2Q8IXI1 618 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 PPM1KQ8N3J5 372 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 CAGE1Q8TC20 777 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 TAS1R2Q8TE23 839 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 AFG1LQ8WV93 481 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 CTNNBL1Q8WYA6 563 aaPredicted RBP4.74□□□□□ -1.65
SRP54-212ENST00000556992 SHC3Q92529 594 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 SEMA4DQ92854 862 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 FAXDC2Q96IV6 333 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 PBKQ96KB5 322 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 ZFYVE21Q9BQ24 234 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 SYT11Q9BT88 431 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 SELENOOQ9BVL4 669 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 PARD6BQ9BYG5 372 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 GPR88Q9GZN0 384 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 CCDC113Q9H0I3 377 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 ISCUQ9H1K1 167 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 C1orf112Q9NSG2 853 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 CATSPERZQ9NTU4 200 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 PRMT7Q9NVM4 692 aaPredicted RBP4.74□□□□□ -1.65
SRP54-212ENST00000556992 GALNT8Q9NY28 637 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 HDAC6Q9UBN7 1215 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 NENFQ9UMX5 172 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 TFR2Q9UP52 801 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 TNFSF13BQ9Y275 285 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 GIT1Q9Y2X7 761 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 Q9Y3F1 56 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 HYOU1Q9Y4L1 999 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 PCDHB2Q9Y5E7 798 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 ATP23Q9Y6H3 246 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 COL1A2P08123 1366 aa4.74□□□□□ -1.65
SRP54-212ENST00000556992 ZNF646O15015 1829 aaPredicted RBP4.74□□□□□ -1.65
SRP54-212ENST00000556992 SPTBN5Q9NRC6 3674 aaKnown RBP4.74□□□□□ -1.65
SRP54-212ENST00000556992 ADGRA3Q8IWK6 1321 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 ADGRA2Q96PE1 1338 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 TARSL2A2RTX5 802 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 GRID2IPA4D2P6 1211 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 INO80B-WBP1J3KQ70 363 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 BUB1O43683 1085 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 ZEB2O60315 1214 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 SGPL1O95470 568 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 C22orf31O95567 290 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 HLA-DRAP01903 254 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 FTLP02792 175 aaPredicted RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 PRKCBP05771 671 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 MYBL1P10243 752 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 MCF2P10911 925 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 HSPA8P11142 646 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 KRT5P13647 590 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 CYP11B1P15538 503 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 H2AFXP16104 143 aaPredicted RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 PROZP22891 400 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 AOAHP28039 575 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 DNAJA1P31689 397 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 RGS2P41220 211 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 ADCYAP1R1P41586 468 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 MEOX1P50221 254 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 LBX1P52954 281 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 HADHBP55084 474 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 NLRP11P59045 1033 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 SLC25A3Q00325 362 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 CDR2Q01850 454 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 HGFACQ04756 655 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 SREBF2Q12772 1141 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 PPFIA1Q13136 1202 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 BIRC3Q13489 604 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 TRPC3Q13507 836 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 EIF4HQ15056 248 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 GPR19Q15760 415 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 FAM187BQ17R55 369 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 GLE1Q53GS7 698 aaKnown RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 TM4SF20Q53R12 229 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 TEX35Q5T0J7 233 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 ATF7IP2Q5U623 682 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 MTHFD1LQ6UB35 978 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 C17orf99Q6UX52 265 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 CRELD2Q6UXH1 353 aaPredicted RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 TRIM72Q6ZMU5 477 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 ANKS3Q6ZW76 656 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 ZNF572Q7Z3I7 529 aaPredicted RBP4.73□□□□□ -1.65
SRP54-212ENST00000556992 SLFN11Q7Z7L1 901 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 ZNF410Q86VK4 478 aa4.73□□□□□ -1.65
SRP54-212ENST00000556992 WDR49Q8IV35 697 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms