RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 UNC45BQ8IWX7 931 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 SIX6OS1Q8N1H7 587 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 CACTIN-AS1Q8N1I8 211 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 SCML4Q8N228 414 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 EID2Q8N6I1 236 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 KDM1BQ8NB78 822 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 FBXL13Q8NEE6 735 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 OR2T34Q8NGX1 318 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 FIBINQ8TAL6 211 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 WFDC5Q8TCV5 224 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 FOXD4L4Q8WXT5 416 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-221ENST00000556571 TSC1Q92574 1164 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 SEMA4DQ92854 862 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 CCDC47Q96A33 483 aaKnown RBP12.35□□□□□ -0.43
ACTN1-221ENST00000556571 AZIN2Q96A70 460 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 FCRL3Q96P31 734 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-221ENST00000556571 OMDQ99983 421 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 MTG2Q9H4K7 406 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 EBF2Q9HAK2 575 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 RAB20Q9NX57 234 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 SERGEFQ9UGK8 458 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 ADAMTS1Q9UHI8 967 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 USP25Q9UHP3 1055 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 TSPAN16Q9UKR8 245 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 CFAP45Q9UL16 551 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 FZD4Q9ULV1 537 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 RAI2Q9Y5P3 530 aa12.35□□□□□ -0.43
ACTN1-221ENST00000556571 SHROOM3Q8TF72 1996 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 A0A1W2PP55 124 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 A0A1W2PR77 199 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 TARSL2A2RTX5 802 aaKnown RBP12.34□□□□□ -0.43
ACTN1-221ENST00000556571 CAPN9O14815 690 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 MID1O15344 667 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 MSI1O43347 362 aaKnown RBP12.34□□□□□ -0.43
ACTN1-221ENST00000556571 STX10O60499 249 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 RNASEH2AO75792 299 aaKnown RBP12.34□□□□□ -0.43
ACTN1-221ENST00000556571 EPHA8P29322 1005 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-221ENST00000556571 MXI1P50539 228 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 SGSHP51688 502 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 BECN1Q14457 450 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 KCNJ12Q14500 433 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 SGO2Q562F6 1265 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 C9orf64Q5T6V5 341 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 NUGGCQ68CJ6 796 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 RFWD3Q6PCD5 774 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 FBXL19Q6PCT2 694 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 ZNF605Q86T29 641 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 CCDC117Q8IWD4 279 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-221ENST00000556571 DHX40Q8IX18 779 aaKnown RBP12.34□□□□□ -0.43
ACTN1-221ENST00000556571 OXR1Q8N573 874 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 SNIP1Q8TAD8 396 aaKnown RBP12.34□□□□□ -0.43
ACTN1-221ENST00000556571 KCTD13Q8WZ19 329 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 FGF11Q92914 225 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 TATDN2Q93075 761 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 MYO19Q96H55 970 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 LMLNQ96KR4 655 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 DDX50Q9BQ39 737 aaKnown RBP12.34□□□□□ -0.43
ACTN1-221ENST00000556571 ERVMER34-1Q9H9K5 563 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 CNGB3Q9NQW8 809 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 RCOR1Q9UKL0 485 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 TMEM131Q92545 1883 aa12.34□□□□□ -0.43
ACTN1-221ENST00000556571 COL5A1P20908 1838 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-221ENST00000556571 TEX51A0A1B0GUA7 166 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 GOLGA6L7A0A1B0GV03 622 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 TYW5A2RUC4 315 aaKnown RBP12.33□□□□□ -0.44
ACTN1-221ENST00000556571 CAPN8A6NHC0 703 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 C10orf142B7Z368 130 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 TLR4O00206 839 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 ACSL4O60488 711 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 RHOBTB3O94955 611 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 IGLV3-27P01718 113 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 SETSIPP0DME0 302 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 ZSCAN22P10073 491 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-221ENST00000556571 GOT1P17174 413 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 CKMT2P17540 419 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 SLC8A1P32418 973 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 CSKP41240 450 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 RXRGP48443 463 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 NXPH1P58417 271 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 DAOAP59103 153 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 FAM133BQ5BKY9 247 aaKnown RBP12.33□□□□□ -0.44
ACTN1-221ENST00000556571 MSANTD2Q6P1R3 559 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 SND1Q7KZF4 910 aaKnown RBP eCLIP12.33□□□□□ -0.44
ACTN1-221ENST00000556571 GPR155Q7Z3F1 870 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 MMAAQ8IVH4 418 aaKnown RBP12.33□□□□□ -0.44
ACTN1-221ENST00000556571 GUF1Q8N442 669 aaKnown RBP12.33□□□□□ -0.44
ACTN1-221ENST00000556571 HJURPQ8NCD3 748 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-221ENST00000556571 SERAC1Q96JX3 654 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 MRGPRX3Q96LB0 322 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 STIM2Q9P246 746 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 KIAA1257Q9ULG3 409 aa12.33□□□□□ -0.44
ACTN1-221ENST00000556571 MAST4O15021 2626 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 ARID1BQ8NFD5 2236 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-221ENST00000556571 EDDM13A0A1B0GTR0 161 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 WNT9AO14904 365 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 MOCS3O95396 460 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 F13A1P00488 732 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 SRPRAP08240 638 aaKnown RBP12.32□□□□□ -0.44
ACTN1-221ENST00000556571 VDRP11473 427 aa12.32□□□□□ -0.44
ACTN1-221ENST00000556571 LCP1P13796 627 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms