RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SNX6Q9UNH7 406 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 MTMR6Q9Y217 621 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 ENTPD4Q9Y227 616 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 POLHQ9Y253 713 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 TBC1D30Q9Y2I9 924 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 PCDHGA2Q9Y5H1 932 aa6.37□□□□□ -1.39
TDP1-215ENST00000556498 CEP170Q5SW79 1584 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 POGZQ7Z3K3 1410 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 MSH6P52701 1360 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 FAM95CA0A1B0GW59 222 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 C5orf60A6NFR6 353 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 LRRC14BA6NHZ5 514 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 TMEM210A6NLX4 147 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 H7C0C1 242 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 KIAA0355O15063 1070 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 SMAD7O15105 426 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 CASC3O15234 703 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 DHX15O43143 795 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 FRS3O43559 492 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 SCO2O43819 266 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 N4BP1O75113 896 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 SLC22A3O75751 556 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 PIGNO95427 931 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 CST3P01034 146 aaPredicted RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 ITGB2P05107 769 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 GLAP06280 429 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 POLBP06746 335 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 NME1P15531 152 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 CHN1P15882 459 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 LAG3P18627 525 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 GNAZP19086 355 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 SLC9A1P19634 815 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 HOXA11P31270 313 aaPredicted RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 HTR7P34969 479 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 IGHMBP2P38935 993 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 CCT3P49368 545 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 POLGP54098 1239 aaPredicted RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 NPEPPSP55786 919 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 ABATP80404 500 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 CEBPZQ03701 1054 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 PIN1Q13526 163 aaPredicted RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 CUL4AQ13619 759 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 ARHGAP19Q14CB8 494 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 FASTKD3Q14CZ7 662 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 MAPK6Q16659 721 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 LRRC36Q1X8D7 754 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 GLE1Q53GS7 698 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 BRMS1LQ5PSV4 323 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 THEM4Q5T1C6 240 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 HES5Q5TA89 166 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 CENPPQ6IPU0 288 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 PLEKHA7Q6IQ23 1121 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 WDR73Q6P4I2 378 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 CLEC2AQ6UVW9 174 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 HHIPL2Q6UWX4 724 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 LDHAL6AQ6ZMR3 332 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 C16orf86Q6ZW13 317 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 NLRC3Q7RTR2 1065 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 CLEC10AQ8IUN9 316 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 TMEM151AQ8N4L1 468 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 ALLCQ8N6M5 410 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 ARFGAP1Q8N6T3 406 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 TTLL6Q8N841 843 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 ANKFN1Q8N957 763 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 FBXO15Q8NCQ5 510 aaPredicted RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 FAM13CQ8NE31 585 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 GRPEL2Q8TAA5 225 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 COG1Q8WTW3 980 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 TSPEARQ8WU66 669 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 HEXDCQ8WVB3 486 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 TANKQ92844 425 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 VPS33AQ96AX1 596 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 FAM136AQ96C01 138 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 SLC25A36Q96CQ1 311 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 ZNF845Q96IR2 970 aaPredicted RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 PSMG3-AS1Q96PY0 264 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 WDR24Q96S15 920 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 CCT8L2Q96SF2 557 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 TBCBQ99426 244 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 TXN2Q99757 166 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 NTMT1Q9BV86 223 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 BRIP1Q9BX63 1249 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 FOXQ1Q9C009 403 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 NAPBQ9H115 298 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 GORASP2Q9H8Y8 452 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 SPACA1Q9HBV2 294 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 PNPLA8Q9NP80 782 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 PRDM11Q9NQV5 511 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 CYP26B1Q9NR63 512 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 ETNK2Q9NVF9 386 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 OBP2AQ9NY56 170 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 FAM153AQ9UHL3 310 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 CPSF3Q9UKF6 684 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 NOB1Q9ULX3 412 aaKnown RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 ARHGAP26Q9UNA1 814 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 C19orf53Q9UNZ5 99 aaPredicted RBP6.36□□□□□ -1.39
TDP1-215ENST00000556498 USP16Q9Y5T5 823 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 USH1CQ9Y6N9 552 aa6.36□□□□□ -1.39
TDP1-215ENST00000556498 DISP1Q96F81 1524 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms