RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ZC3H10Q96K80 434 aaKnown RBP5.53□□□□□ -1.52
SRP54-211ENST00000556445 BAG1Q99933 345 aaPredicted RBP5.53□□□□□ -1.52
SRP54-211ENST00000556445 CCDC68Q9H2F9 335 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 JMJD4Q9H9V9 463 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 C6orf50Q9HD87 102 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 IL17RBQ9NRM6 502 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 BARHL2Q9NY43 387 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 MTMR4Q9NYA4 1195 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 VPS54Q9P1Q0 977 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 NYAP2Q9P242 653 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 PI4KBQ9UBF8 816 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 AASSQ9UDR5 926 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 MAD2L2Q9UI95 211 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 KCNJ14Q9UNX9 436 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 KIF13BQ9NQT8 1826 aa5.53□□□□□ -1.52
SRP54-211ENST00000556445 SNED1Q8TER0 1413 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 IGKV6D-41A0A0C4DH26 115 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 A0A1B0GVL5 298 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 B4DLN1 442 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 HOXC11O43248 304 aaPredicted RBP5.52□□□□□ -1.53
SRP54-211ENST00000556445 NMT2O60551 498 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 SMC2O95347 1197 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 THP07101 528 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 MYF5P13349 255 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 PFKFB1P16118 471 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 HTR1BP28222 390 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 MARCKSP29966 332 aaPredicted RBP5.52□□□□□ -1.53
SRP54-211ENST00000556445 CHRNA5P30532 468 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 MCM7P33993 719 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 NDUFA8P51970 172 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 DRG2P55039 364 aaKnown RBP5.52□□□□□ -1.53
SRP54-211ENST00000556445 NR1H2P55055 460 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 MRPS9P82933 396 aaKnown RBP5.52□□□□□ -1.53
SRP54-211ENST00000556445 FOXO1Q12778 655 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 CSRP2Q16527 193 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 PGS1Q32NB8 556 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 RABL3Q5HYI8 236 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 GPRIN1Q7Z2K8 1008 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 KCNK18Q7Z418 384 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 GALNT13Q8IUC8 556 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 TRIML1Q8N9V2 468 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 CNNM3Q8NE01 707 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 OR8H1Q8NGG4 311 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 UCMAQ8WVF2 138 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 ZFPM2Q8WW38 1151 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 CEP95Q96GE4 821 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 BPIFA3Q9BQP9 254 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 CPPED1Q9BRF8 314 aaPredicted RBP5.52□□□□□ -1.53
SRP54-211ENST00000556445 SORBS1Q9BX66 1292 aaKnown RBP5.52□□□□□ -1.53
SRP54-211ENST00000556445 FTOQ9C0B1 505 aaKnown RBP eCLIP5.52□□□□□ -1.53
SRP54-211ENST00000556445 ZMYND12Q9H0C1 365 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 ABCG4Q9H172 646 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 GOLPH3LQ9H4A5 285 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 RIOX1Q9H6W3 641 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 MMRN2Q9H8L6 949 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 SLC2A4RGQ9NR83 387 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 GJB4Q9NTQ9 266 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 IRAK4Q9NWZ3 460 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 GPRC5DQ9NZD1 345 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 SEL1LQ9UBV2 794 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 HERC5Q9UII4 1024 aaKnown RBP5.52□□□□□ -1.53
SRP54-211ENST00000556445 TUBD1Q9UJT1 453 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 HPSEQ9Y251 543 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 ATRNL1Q5VV63 1379 aa5.52□□□□□ -1.53
SRP54-211ENST00000556445 A0A1W2PPH5 198 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 PGPEP1LA6NFU8 196 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 H7C0S8 307 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 SMIM22K7EJ46 135 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 USO1O60763 962 aaKnown RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 FAM20BO75063 409 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 NDUFS2O75306 463 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 ITGA10O75578 1167 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 ADCY5O95622 1261 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 SNHG28P0DPA3 235 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 MYCLP12524 364 aaPredicted RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 TSHRP16473 764 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 RPS12P25398 132 aaKnown RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 HOXA7P31268 230 aaPredicted RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 LONP1P36776 959 aaKnown RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 PRPHP41219 470 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 HSPA7P48741 367 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 MTNR1BP49286 362 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 PTTG1IPP53801 180 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 NAPAP54920 295 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 CDK17Q00537 523 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 PMS2P11Q13670 270 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 TNIP1Q15025 636 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 NONOQ15233 471 aaKnown RBP eCLIP5.51□□□□□ -1.53
SRP54-211ENST00000556445 DLGAP5Q15398 846 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 MUM1Q2TAK8 710 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 ZACNQ401N2 412 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 TTC31Q49AM3 519 aaPredicted RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 CERKLQ49MI3 558 aaPredicted RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 JMJD6Q6NYC1 403 aaPredicted RBP5.51□□□□□ -1.53
SRP54-211ENST00000556445 SARM1Q6SZW1 724 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 OLFM4Q6UX06 510 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 TMEM179Q6ZVK1 233 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 MAEAQ7L5Y9 396 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 RASGRP2Q7LDG7 609 aa5.51□□□□□ -1.53
SRP54-211ENST00000556445 FAM83AQ86UY5 434 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms